RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 E2F3O00716 465 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC30A4O14863 429 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CASC3O15234 703 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 AVILO75366 819 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC43A1O75387 559 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 FLOT1O75955 427 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CELF2O95319 508 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 YEATS4O95619 227 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 POP4O95707 220 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 LIPFP07098 398 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 DLATP10515 647 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CD19P15391 556 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ADRA2CP18825 462 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 FUT1P19526 365 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 FDXRP22570 491 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 HNRNPA2B1P22626 353 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 PSMA5P28066 241 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CCND2P30279 289 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 PTPN7P35236 360 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC16A2P36021 539 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CAMPP49913 170 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 AP3M2P53677 418 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CARD18P57730 90 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CLRN1P58418 232 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 RBM6P78332 1123 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 EFNB1P98172 346 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CSTF3Q12996 717 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SCGB2A2Q13296 93 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 RUNX2Q13950 521 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 KCNC3Q14003 757 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SQLEQ14534 574 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 LRRC23Q53EV4 343 aaPredicted RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 TAF1BQ53T94 588 aaPredicted RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM47AQ5JRC9 791 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF569Q5MCW4 686 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 DNTTIP2Q5QJE6 756 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ATAD3BQ5T9A4 648 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 KIAA1324Q6UXG2 1013 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 Q6ZNX1 250 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 MTSS1LQ765P7 747 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SLC46A3Q7Z3Q1 461 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SYVN1Q86TM6 617 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CUZD1Q86UP6 607 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SPATA24Q86W54 205 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF280BQ86YH2 543 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 LRRC49Q8IUZ0 686 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM184AQ8NB25 1140 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 UXS1Q8NBZ7 420 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 OR56A1Q8NGH5 318 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 OCC1Q8TAD7 63 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 MIPOL1Q8TD10 442 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 BPIFB1Q8TDL5 484 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ABHD5Q8WTS1 349 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 PTPMT1Q8WUK0 201 aaPredicted RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF480Q8WV37 535 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ROBO4Q8WZ75 1007 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SYN2Q92777 582 aaPredicted RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 EXT2Q93063 718 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ARRDC3Q96B67 414 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 RMDN2Q96LZ7 410 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 TTC25Q96NG3 672 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 RAD9AQ99638 391 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 MYOCQ99972 504 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 GAL3ST1Q99999 423 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 WDR83Q9BRX9 315 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 TRIM2Q9C040 744 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 LRRC40Q9H9A6 602 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 TUFT1Q9NNX1 390 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 SEMA4GQ9NTN9 838 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 DNAJC17Q9NVM6 304 aaKnown RBP4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 RLIMQ9NVW2 624 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 HAO2Q9NYQ3 351 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 OGFRQ9NZT2 677 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 VPS51Q9UID3 782 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 ITGA11Q9UKX5 1188 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 DNPEPQ9ULA0 475 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 PLAGL1Q9UM63 463 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 PCDHB2Q9Y5E7 798 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 CDY1Q9Y6F8 540 aa4.31□□□□□ -1.72
SMARCA5-202ENST00000508573 PHLPP2Q6ZVD8 1323 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 LOC100509620A0A075B734 347 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 A0A087WV48 116 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 EDDM13A0A1B0GTR0 161 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 A0A1B0GVM2 712 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 DNALI1O14645 258 aaPredicted RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 PER2O15055 1255 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ST8SIA3O43173 380 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 CBFA2T3O75081 653 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 USP12O75317 370 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 RBMXL2O75526 392 aaKnown RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 CTAG2O75638 210 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SURF6O75683 361 aaKnown RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 IDH1O75874 414 aaKnown RBP4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 OR6B1O95007 311 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 SERPINC1P01008 464 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 FGBP02675 491 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 FAM86B2P0C5J1 330 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 LYL1P12980 280 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ANXA8P13928 327 aa4.3□□□□□ -1.72
SMARCA5-202ENST00000508573 ZNF8P17098 575 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms