RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 FNIP1Q8TF40 1166 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 THAP4Q8WY91 577 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 SCAMP4Q969E2 229 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 MCEEQ96PE7 176 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 MGME1Q9BQP7 344 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 SLC25A23Q9BV35 468 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 TBC1D10AQ9BXI6 508 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 TRIM55Q9BYV6 548 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 VPS16Q9H269 839 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 DHX35Q9H5Z1 703 aaKnown RBP9.29□□□□□ -0.92
NEDD9-211ENST00000508546 RMI1Q9H9A7 625 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 NOD2Q9HC29 1040 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 GPATCH2LQ9NWQ4 482 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 CPNE7Q9UBL6 633 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 ZNHIT2Q9UHR6 403 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 CD84Q9UIB8 345 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 PADI1Q9ULC6 663 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 PCDHGB7Q9Y5F8 929 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 ZGRF1Q86YA3 2104 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 DAPK3O43293 454 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 DNAJB5O75953 348 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 ASMTLO95671 621 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 PEX11BO96011 259 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 FGF5P12034 268 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 VARSP26640 1264 aaKnown RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 CASP14P31944 242 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 HCAR3P49019 387 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 CLCNKAP51800 687 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 ZNF135P52742 658 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 GFERP55789 205 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 UBE2IP63279 158 aaKnown RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 OGDHQ02218 1023 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 PTSQ03393 145 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 PTPRRQ15256 657 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 INPP5JQ15735 1006 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 CA9Q16790 459 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 EIF2S3LQ2VIR3 472 aaKnown RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 ERMARDQ5T6L9 678 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 ARMC12Q5T9G4 340 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 LRRC66Q68CR7 880 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 CYB5D1Q6P9G0 228 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 CHST15Q7LFX5 561 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 PSTKQ8IV42 348 aaKnown RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 RASGRP3Q8IV61 690 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 NDUFAF2Q8N183 169 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 PIH1D2Q8WWB5 315 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 OR6C1Q96RD1 312 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 GPR87Q9BY21 358 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 SLC29A3Q9BZD2 475 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 UNKQ9C0B0 810 aaKnown RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 BRD8Q9H0E9 1235 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 ACTL8Q9H568 366 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 LHX9Q9NQ69 397 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 OGFRQ9NZT2 677 aa9.28□□□□□ -0.92
NEDD9-211ENST00000508546 RCOR3Q9P2K3 495 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 PCYT1BQ9Y5K3 369 aaPredicted RBP9.28□□□□□ -0.92
NEDD9-211ENST00000508546 A0A0U1RQS6 177 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 ARHGAP10A1A4S6 786 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 TCP11X1B4DZS4 312 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 FZD6O60353 706 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 GADD45BO75293 160 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-211ENST00000508546 SPAG6O75602 509 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 UBXN7O94888 489 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 CTPS1P17812 591 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 XRCC1P18887 633 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-211ENST00000508546 STC1P52823 247 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 POLR2FP61218 127 aaKnown RBP9.27□□□□□ -0.93
NEDD9-211ENST00000508546 SH3BP2P78314 561 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 DPYSQ14117 519 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 NAA30Q147X3 362 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-211ENST00000508546 UGT8Q16880 541 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 PRR30Q53SZ7 412 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-211ENST00000508546 HSP90AA4PQ58FG1 418 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 DCUN1D2Q6PH85 259 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 TMEM26Q6ZUK4 368 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 PRSS42Q7Z5A4 293 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 PPP1R3BQ86XI6 285 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 HPS6Q86YV9 775 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 TP53INP2Q8IXH6 220 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 BBS5Q8N3I7 341 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 CT55Q8WUE5 264 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 KLHL6Q8WZ60 621 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 FCRL4Q96PJ5 515 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
NEDD9-211ENST00000508546 AGAP2Q99490 1192 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 SNRNP25Q9BV90 132 aaKnown RBP9.27□□□□□ -0.93
NEDD9-211ENST00000508546 RIOK2Q9BVS4 552 aaKnown RBP9.27□□□□□ -0.93
NEDD9-211ENST00000508546 LNPEPQ9UIQ6 1025 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 DNPEPQ9ULA0 475 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 CNOT6Q9ULM6 557 aaKnown RBP9.27□□□□□ -0.93
NEDD9-211ENST00000508546 KCNK6Q9Y257 313 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 PRKAB1Q9Y478 270 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 ZNF451Q9Y4E5 1061 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 CCDC88CQ9P219 2028 aa9.27□□□□□ -0.93
NEDD9-211ENST00000508546 CNTRLQ7Z7A1 2325 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 A0A0J9YYE9 177 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 HNRNPRO43390 633 aaKnown RBP9.26□□□□□ -0.93
NEDD9-211ENST00000508546 MAFKO60675 156 aa9.26□□□□□ -0.93
NEDD9-211ENST00000508546 SNX2O60749 519 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms