RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 ZFXP17010 805 aaPredicted RBP16.06■□□□□ 0.16
LMNA-222ENST00000508500 PTPN3P26045 913 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 FASLGP48023 281 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 MARCKSL1P49006 195 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 MAPK10P53779 464 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 RHDQ02161 417 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 WASHC5Q12768 1159 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 LRP8Q14114 963 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 PRKD1Q15139 912 aaPredicted RBP16.06■□□□□ 0.16
LMNA-222ENST00000508500 PCSK7Q16549 785 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.06■□□□□ 0.16
LMNA-222ENST00000508500 KIAA1614Q5VZ46 1190 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 CHST15Q7LFX5 561 aaPredicted RBP16.06■□□□□ 0.16
LMNA-222ENST00000508500 ZFAND4Q86XD8 727 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 TMEM159Q96B96 161 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 CCDC74BQ96LY2 380 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 ADGRE3Q9BY15 652 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 ZFYVE1Q9HBF4 777 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 GLOD4Q9HC38 313 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 UBP1Q9NZI7 540 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 ATXN10Q9UBB4 475 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 TBC1D29Q9UFV1 150 aa16.06■□□□□ 0.16
LMNA-222ENST00000508500 PPP1R12AO14974 1030 aaPredicted RBP16.05■□□□□ 0.16
LMNA-222ENST00000508500 NUAK1O60285 661 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 CST8O60676 142 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 FGF3P11487 239 aaPredicted RBP16.05■□□□□ 0.16
LMNA-222ENST00000508500 MPSTP25325 297 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 MAGEA1P43355 309 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 LIMK2P53671 638 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 CDK18Q07002 472 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 SLC14A2Q15849 920 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 CLPPQ16740 277 aaPredicted RBP16.05■□□□□ 0.16
LMNA-222ENST00000508500 ALS2CLQ60I27 953 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 SPOCD1Q6ZMY3 1216 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 CCDC81Q6ZN84 652 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 ZNF605Q86T29 641 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 DTX1Q86Y01 620 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 CCHCR1Q8TD31 782 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 TEKT5Q96M29 485 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 CCNL2Q96S94 520 aaPredicted RBP16.05■□□□□ 0.16
LMNA-222ENST00000508500 CMKLR1Q99788 373 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 MAGEE1Q9HCI5 957 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 TMPRSS11EQ9UL52 423 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 KCNK6Q9Y257 313 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 ZNF711Q9Y462 761 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 BSNQ9UPA5 3926 aa16.05■□□□□ 0.16
LMNA-222ENST00000508500 SPOPO43791 374 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 THRAP10827 490 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 ACP5P13686 325 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 ZNF8P17098 575 aaPredicted RBP16.04■□□□□ 0.16
LMNA-222ENST00000508500 BPIP17213 487 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 NOMO1Q15155 1222 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 KHDC1Q4VXA5 237 aaKnown RBP16.04■□□□□ 0.16
LMNA-222ENST00000508500 KAZNQ674X7 775 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 IYDQ6PHW0 289 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 KDELC1Q6UW63 502 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 OR4D9Q8NGE8 314 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 TRIM44Q96DX7 344 aaPredicted RBP16.04■□□□□ 0.16
LMNA-222ENST00000508500 HERPUD2Q9BSE4 406 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 CARD9Q9H257 536 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 KCNK4Q9NYG8 393 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
LMNA-222ENST00000508500 NFKBIL1Q9UBC1 381 aaPredicted RBP16.04■□□□□ 0.16
LMNA-222ENST00000508500 SLC23A2Q9UGH3 650 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 BOD1L1Q8NFC6 3051 aa16.04■□□□□ 0.16
LMNA-222ENST00000508500 hCG_1818297A0A087WSY0 165 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 A0A0A6YYK5 440 aaPredicted RBP16.03■□□□□ 0.16
LMNA-222ENST00000508500 LOC285095A0A1B0GVY8 99 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 GRID2O43424 1007 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 PSTPIP1O43586 416 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 PMPCBO75439 489 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 NDST3O95803 873 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 LIPCP11150 499 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 WT1P19544 449 aaPredicted RBP16.03■□□□□ 0.16
LMNA-222ENST00000508500 NR2C2P49116 596 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 GSDMDP57764 484 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 DCDC1P59894 354 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 PEX6Q13608 980 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 LY6DQ14210 128 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 ADGRG6Q86SQ4 1221 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 TRAM1L1Q8N609 369 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 KRT35Q92764 455 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 SPATA16Q9BXB7 569 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 RMI1Q9H9A7 625 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 OCIAD1Q9NX40 245 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 SCHIP1Q9P0W5 487 aaPredicted RBP16.03■□□□□ 0.16
LMNA-222ENST00000508500 PDP2Q9P2J9 529 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 PCDHA13Q9Y5I0 950 aa16.03■□□□□ 0.16
LMNA-222ENST00000508500 RCCD1A6NED2 376 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 PRR19A6NJB7 356 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 HGSO14964 777 aaPredicted RBP16.02■□□□□ 0.16
LMNA-222ENST00000508500 CHUKO15111 745 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 SLC4A1P02730 911 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 NFKB1P19838 968 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 CA5AP35218 305 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 CHRNA4P43681 627 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 BIRC2Q13490 618 aa16.02■□□□□ 0.16
LMNA-222ENST00000508500 TRA2AQ13595 282 aaKnown RBP eCLIP16.02■□□□□ 0.16
LMNA-222ENST00000508500 TAF1BQ53T94 588 aaPredicted RBP16.02■□□□□ 0.16
LMNA-222ENST00000508500 TMEM71Q6P5X7 295 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms