RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 KLHL9Q9P2J3 617 aa4.36□□□□□ -1.71
UBE2D3-225ENST00000508476 A0A1W2PP11 408 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 TMEM178BH3BS89 294 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 HS3ST1O14792 307 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 PAGE4O60829 102 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 CTSVO60911 334 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 PATE4P0C8F1 98 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 ATP1A3P13637 1013 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 UGT1A1P22309 533 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 HOXC9P31274 260 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 PBX3P40426 434 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 RARSP54136 660 aaKnown RBP4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 MAD2L1Q13257 205 aaPredicted RBP4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 CEACAM20Q6UY09 585 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 WDSUB1Q8N9V3 476 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 THAP6Q8TBB0 222 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 METTL6Q8TCB7 284 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 KCNG4Q8TDN1 519 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 PERPQ96FX8 193 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 TMEM68Q96MH6 324 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 GFRA4Q9GZZ7 299 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 LRMDAQ9H2I8 198 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 MAP3K20Q9NYL2 800 aaKnown RBP4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 OR14J1Q9UGF5 321 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 POLG2Q9UHN1 485 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 CLIC4Q9Y696 253 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 SNED1Q8TER0 1413 aa4.35□□□□□ -1.71
UBE2D3-225ENST00000508476 A0A1W2PQF6 199 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 OR5K3A6NET4 321 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 KCNN4O15554 427 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 SYNGR3O43761 229 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 WISP2O76076 250 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 TUBBP07437 444 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 UBA1P22314 1058 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 ALDH4A1P30038 563 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 TERF1P54274 439 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 TUBB4BP68371 445 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 OLR1P78380 273 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 GAGE5Q13069 117 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 GAGE6Q13070 117 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 TMEM30BQ3MIR4 351 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 WDR38Q5JTN6 314 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 CCNYL2Q5T2Q4 361 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 SLC35E4Q6ICL7 350 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 PAPD4Q6PIY7 484 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 ATF7IPQ6VMQ6 1270 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 ZNF704Q6ZNC4 412 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 ANO5Q75V66 913 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 R3HCC1LQ7Z5L2 792 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 KRTAP7-1Q8IUC3 87 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 SMAP1Q8IYB5 467 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 CTCFLQ8NI51 663 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 INTS12Q96CB8 462 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 HARBI1Q96MB7 349 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 RBM4Q9BWF3 364 aaKnown RBP4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 STRA6Q9BX79 667 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 PIGMQ9H3S5 423 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 TCP11L1Q9NUJ3 509 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 TAS2R10Q9NYW0 307 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 COPG2Q9UBF2 871 aa4.34□□□□□ -1.71
UBE2D3-225ENST00000508476 ATP2A1O14983 1001 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 PRKNO60260 465 aaPredicted RBP4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 SEC14L2O76054 403 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 AGR2O95994 175 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 AHRP35869 848 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 CCDC6Q16204 474 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 MYLK3Q32MK0 819 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 ZNF876PQ49A33 203 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 NSUN5P2Q63ZY6 315 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 LCN10Q6JVE6 187 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 SLC27A1Q6PCB7 646 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 GSTA5Q7RTV2 222 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 PIWIL4Q7Z3Z4 852 aaKnown RBP4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 FCAMRQ8WWV6 532 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 PHF21AQ96BD5 680 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 STAMBPL1Q96FJ0 436 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 WDFY2Q96P53 400 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 POLR1BQ9H9Y6 1135 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 RANGRFQ9HD47 186 aaPredicted RBP4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 UBN1Q9NPG3 1134 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 DLGAP2Q9P1A6 1054 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 MAU2Q9Y6X3 613 aa4.33□□□□□ -1.72
UBE2D3-225ENST00000508476 CIDEAO60543 219 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 JRKO75564 520 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 BAG4O95429 457 aaKnown RBP4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 ERVK11-1P61568 191 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 FCN2Q15485 313 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 DPCR1Q3MIW9 517 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 SFMBT2Q5VUG0 894 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 CYP20A1Q6UW02 462 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 Q75L30 129 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 SDCCAG8Q86SQ7 713 aaPredicted RBP4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 STPG4Q8N801 248 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 TSPYL6Q8N831 410 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 CNBD1Q8NA66 436 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 TMEM116Q8NCL8 245 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 OR1J2Q8NGS2 313 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 UTP15Q8TED0 518 aaKnown RBP4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 TM9SF4Q92544 642 aa4.32□□□□□ -1.72
UBE2D3-225ENST00000508476 LGALS12Q96DT0 336 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms