RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 WT1P19544 449 aaPredicted RBP12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 NOP2P46087 812 aaKnown RBP12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 DCDC1P59894 354 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 DYNLT1P63172 113 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 HHEXQ03014 270 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 TCEAL1Q15170 157 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 SLC14A2Q15849 920 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 ZNF569Q5MCW4 686 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 MANEAQ5SRI9 462 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 TMEM164Q5U3C3 297 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 ALS2CLQ60I27 953 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 TMEM71Q6P5X7 295 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 MFSD7Q6UXD7 560 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 B4GALNT4Q76KP1 1039 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 AGBL5Q8NDL9 886 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 SPATA22Q8NHS9 363 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 RNF25Q96BH1 459 aaPredicted RBP12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 TAAR9Q96RI9 348 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 DPYSL5Q9BPU6 564 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 HERPUD2Q9BSE4 406 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 SLC25A51Q9H1U9 297 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 CARD9Q9H257 536 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 MAGEE1Q9HCI5 957 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 ARFGAP3Q9NP61 516 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 SARS2Q9NP81 518 aaKnown RBP12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 SEPT10Q9P0V9 454 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 PDP2Q9P2J9 529 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 ATXN10Q9UBB4 475 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 SHOC2Q9UQ13 582 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 ZNF711Q9Y462 761 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 HYOU1Q9Y4L1 999 aa12.87□□□□□ -0.35
HMGCS1-205ENST00000508319 GRID2O43424 1007 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 SLC4A1P02730 911 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 ZFXP17010 805 aaPredicted RBP12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 ZNF8P17098 575 aaPredicted RBP12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 PTPN3P26045 913 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 CDKN2BP42772 138 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 PRKD1Q15139 912 aaPredicted RBP12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 PCSK7Q16549 785 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 TAZQ16635 292 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 LINC00303Q3SY05 128 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 ZNF648Q5T619 568 aaPredicted RBP12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 IYDQ6PHW0 289 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 KDELC2Q7Z4H8 507 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 RFX6Q8HWS3 928 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 CNGA4Q8IV77 575 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 RHOT1Q8IXI2 618 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 BMPERQ8N8U9 685 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 EXD3Q8N9H8 876 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 GPR26Q8NDV2 337 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 OR10G6Q8NH81 332 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 ART4Q93070 314 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 SLC38A3Q99624 504 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 ZSCAN5AQ9BUG6 496 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 DDA1Q9BW61 102 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 SPATA16Q9BXB7 569 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 MAK16Q9BXY0 300 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 ZMYND15Q9H091 742 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 OR2AG1Q9H205 316 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 PLSCR2Q9NRY7 297 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 OCIAD1Q9NX40 245 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 DDX56Q9NY93 547 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 INTUQ9ULD6 942 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 B3GALT1Q9Y5Z6 326 aa12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 ZNF106Q9H2Y7 1883 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-205ENST00000508319 B4E171 279 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 ZIC2O95409 532 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 ITGB2P05107 769 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 TNNT1P13805 278 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 PECAM1P16284 738 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 COMTP21964 271 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 TSPAN7P41732 249 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 SLC1A1P43005 524 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 CDK18Q07002 472 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 TBX2Q13207 712 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 NFATC2Q13469 925 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 SKOR2Q2VWA4 1001 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 TEX44Q53QW1 395 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 PDPK2PQ6A1A2 396 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 WDR74Q6RFH5 385 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 PHYKPLQ8IUZ5 450 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 TRAM1L1Q8N609 369 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 CCDC112Q8NEF3 446 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 HTR3CQ8WXA8 447 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 JPH3Q8WXH2 748 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 EXTL1Q92935 676 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 TSPY26PQ9H489 355 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 GOLPH3Q9H4A6 298 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 STN1Q9H668 368 aaKnown RBP12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 GLOD4Q9HC38 313 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 PRDM8Q9NQV8 689 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 SAE1Q9UBE0 346 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 PCDHB11Q9Y5F2 797 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 SPO11Q9Y5K1 396 aa12.85□□□□□ -0.35
HMGCS1-205ENST00000508319 A0A0A6YYK5 440 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-205ENST00000508319 KIR2DS5A0A0G2JLQ3 304 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms