RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 KLHL15Q96M94 604 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 NCAPGQ9BPX3 1015 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 KXD1Q9BQD3 176 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 CLSTN3Q9BQT9 956 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 TXLNGYQ9BZA5 131 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 MUC13Q9H3R2 512 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 FBRSL1Q9HCM7 1045 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 CISD1Q9NZ45 108 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZNF224Q9NZL3 707 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 SLC9A2Q9UBY0 812 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 SIX4Q9UIU6 781 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZNF711Q9Y462 761 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 A3GALT2U3KPV4 340 aa4.18□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM237BA0A1B0GVD1 139 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 NPIPB15A6NHN6 443 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 CBY3A6NI87 242 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 TBCAO75347 108 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 CLDN14O95500 239 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 ATP1A1P05023 1023 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 LINC00271P0C7V0 271 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 VDRP11473 427 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 IL15P40933 162 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 HADHAP40939 763 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 IFI35P80217 286 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 EFNB1P98172 346 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 TMEM115Q12893 351 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 EPS8Q12929 822 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 CDC16Q13042 620 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 PRICKLE4Q2TBC4 344 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 TMEM30BQ3MIR4 351 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 DUSP28Q4G0W2 176 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 ATP13A5Q4VNC0 1218 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 SLC9B1Q4ZJI4 515 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 NAA16Q6N069 864 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 CPLX2Q6PUV4 134 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 CCNI2Q6ZMN8 369 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 TEX11Q8IYF3 940 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 ARHGEF2Q92974 986 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 CMTM3Q96MX0 182 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 TTC14Q96N46 770 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 NR1H4Q96RI1 486 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 PIP5K1AQ99755 562 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 MXRA8Q9BRK3 442 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 NUF2Q9BZD4 464 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 SNTG1Q9NSN8 517 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 KIAA1456Q9P272 454 aa4.17□□□□□ -1.74
TRAPPC13-209ENST00000508304 A0A0U1RQF3 1178 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 LRRC53A6NM62 1247 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 A8MV72 311 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 TNFSF14O43557 240 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 MLYCDO95822 493 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 EIF2S1P05198 315 aaKnown RBP4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 IRF1P10914 325 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 CETPP11597 493 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 SRCP12931 536 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 AZU1P20160 251 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 PSMB10P40306 273 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 CLCN3P51790 818 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 FUT6P51993 359 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 GSTA3Q16772 222 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 HIST2H2ACQ16777 129 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 SYT16Q17RD7 645 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 BMP2KLQ5H9B9 411 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 CDC73Q6P1J9 531 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 KLHL35Q6PF15 583 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 KRT74Q7RTS7 529 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 VSIG1Q86XK7 387 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 DSELQ8IZU8 1212 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 ZCCHC9Q8N567 271 aaKnown RBP4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 WDTC1Q8N5D0 677 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 AGBL3Q8NEM8 1001 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 MAGEC3Q8TD91 643 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 TANKQ92844 425 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 SNAPC3Q92966 411 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 ERGIC1Q969X5 290 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM149B1Q96BN6 582 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 FBXL8Q96CD0 374 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 BBS4Q96RK4 519 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 ALDH8A1Q9H2A2 487 aaPredicted RBP4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 RRP7BPQ9NSQ0 103 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 FAM96BQ9Y3D0 163 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 NFE2L3Q9Y4A8 694 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 KDM3AQ9Y4C1 1321 aa4.16□□□□□ -1.74
TRAPPC13-209ENST00000508304 A0A1W2PQ09 198 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 C16orf97H3BN30 126 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 H7C0S8 307 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 GJB3O75712 270 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 MCM3P25205 808 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 HNRNPH1P31943 449 aaKnown RBP4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 ACSL1P33121 698 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 CTNNA1P35221 906 aaKnown RBP4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 CPOXP36551 454 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 LINC01547P58512 204 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 OLR1P78380 273 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 FRG1Q14331 258 aaKnown RBP4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 OASLQ15646 514 aaKnown RBP4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 SLC1A5Q15758 541 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 TCTN1Q2MV58 587 aa4.15□□□□□ -1.75
TRAPPC13-209ENST00000508304 DPCR1Q3MIW9 517 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms