RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ARHGAP12Q8IWW6 846 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 TRIM48Q8IWZ4 208 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 ELOA2Q8IYF1 753 aaPredicted RBP5.71□□□□□ -1.5
GYPB-208ENST00000507009 SFRP1Q8N474 314 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 NPWQ8N729 165 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 LRRN4Q8WUT4 740 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 ZNF653Q96CK0 615 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 AP2M1Q96CW1 435 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 KCTD15Q96SI1 283 aaPredicted RBP5.71□□□□□ -1.5
GYPB-208ENST00000507009 RUFY1Q96T51 708 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 AGAP2Q99490 1192 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 ZPBPQ9BS86 351 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 CNPY3Q9BT09 278 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 SNRNP25Q9BV90 132 aaKnown RBP5.71□□□□□ -1.5
GYPB-208ENST00000507009 RIOK2Q9BVS4 552 aaKnown RBP5.71□□□□□ -1.5
GYPB-208ENST00000507009 NAA15Q9BXJ9 866 aaKnown RBP5.71□□□□□ -1.5
GYPB-208ENST00000507009 TRIM55Q9BYV6 548 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 ABCG8Q9H221 673 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 GANQ9H2C0 597 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 NOD2Q9HC29 1040 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 ARFGAP3Q9NP61 516 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 FBXO8Q9NRD0 319 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 SAMSN1Q9NSI8 373 aaKnown RBP5.71□□□□□ -1.5
GYPB-208ENST00000507009 PGPEP1Q9NXJ5 209 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 TBC1D29Q9UFV1 150 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 SLC17A4Q9Y2C5 497 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 TTLL3Q9Y4R7 772 aa5.71□□□□□ -1.5
GYPB-208ENST00000507009 TMEM184BQ9Y519 407 aaPredicted RBP5.71□□□□□ -1.5
GYPB-208ENST00000507009 PCYT1BQ9Y5K3 369 aaPredicted RBP5.71□□□□□ -1.5
GYPB-208ENST00000507009 ARGFXA6NJG6 315 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 A6NL46 340 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 SIGLEC16A6NMB1 481 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 FIGNL2A6NMB9 653 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 EPHB6O15197 1021 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 KIF1CO43896 1103 aaKnown RBP5.7□□□□□ -1.5
GYPB-208ENST00000507009 SOCS5O75159 536 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 CREG1O75629 220 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 SOD1P00441 154 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 SLC4A1P02730 911 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 UNGP13051 313 aaPredicted RBP5.7□□□□□ -1.5
GYPB-208ENST00000507009 NFKBIAP25963 317 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 FASLGP48023 281 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 LEPRP48357 1165 aaKnown RBP5.7□□□□□ -1.5
GYPB-208ENST00000507009 PGDP52209 483 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 PMS2P54278 862 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 NSUN2Q08J23 767 aaKnown RBP eCLIP5.7□□□□□ -1.5
GYPB-208ENST00000507009 SQSTM1Q13501 440 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 DNASE1L3Q13609 305 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 RFTN1Q14699 578 aaPredicted RBP5.7□□□□□ -1.5
GYPB-208ENST00000507009 NR6A1Q15406 480 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.7□□□□□ -1.5
GYPB-208ENST00000507009 DPCR1Q3MIW9 517 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 TDRD12Q587J7 1177 aaKnown RBP5.7□□□□□ -1.5
GYPB-208ENST00000507009 ZNF648Q5T619 568 aaPredicted RBP5.7□□□□□ -1.5
GYPB-208ENST00000507009 ARMC12Q5T9G4 340 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 LRRC66Q68CR7 880 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 FAM199XQ6PEV8 388 aaPredicted RBP5.7□□□□□ -1.5
GYPB-208ENST00000507009 WDR74Q6RFH5 385 aaPredicted RBP5.7□□□□□ -1.5
GYPB-208ENST00000507009 CRTC3Q6UUV7 619 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 ADAMTSL4Q6UY14 1074 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 FAM92BQ6ZTR7 304 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 RFX8Q6ZV50 586 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 MON1BQ7L1V2 547 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 PLXDC1Q8IUK5 500 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 BBS5Q8N3I7 341 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 PGBD5Q8N414 524 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 LZTR1Q8N653 840 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 MLKLQ8NB16 471 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 GALNT11Q8NCW6 608 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 C3orf20Q8ND61 904 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 CT55Q8WUE5 264 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 NSMCE1Q8WV22 266 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 SH3KBP1Q96B97 665 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 C9orf72Q96LT7 481 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 PSKH2Q96QS6 385 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 NUDCD1Q96RS6 583 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 PEBP4Q96S96 227 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 SLC25A23Q9BV35 468 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 SPRY4Q9C004 299 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 ACTL8Q9H568 366 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 NT5MQ9NPB1 228 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 ACSS2Q9NR19 701 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 DONSONQ9NYP3 566 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 TRIM10Q9UDY6 481 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 FKBPLQ9UIM3 349 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 PHTF1Q9UMS5 762 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 CACNA1DQ01668 2161 aa5.7□□□□□ -1.5
GYPB-208ENST00000507009 UNC79Q9P2D8 2635 aa5.69□□□□□ -1.5
GYPB-208ENST00000507009 NOTCH2Q04721 2471 aa5.69□□□□□ -1.5
GYPB-208ENST00000507009 SPTBN1Q01082 2364 aaKnown RBP5.69□□□□□ -1.5
GYPB-208ENST00000507009 A0A1W2PQ67 120 aa5.69□□□□□ -1.5
GYPB-208ENST00000507009 PDZK1P1A8MUH7 402 aa5.69□□□□□ -1.5
GYPB-208ENST00000507009 DDX3YO15523 660 aaKnown RBP5.69□□□□□ -1.5
GYPB-208ENST00000507009 HTRA2O43464 458 aaPredicted RBP5.69□□□□□ -1.5
GYPB-208ENST00000507009 KRT86O43790 486 aa5.69□□□□□ -1.5
GYPB-208ENST00000507009 SPAG6O75602 509 aa5.69□□□□□ -1.5
GYPB-208ENST00000507009 RNF8O76064 485 aa5.69□□□□□ -1.5
GYPB-208ENST00000507009 UBXN7O94888 489 aa5.69□□□□□ -1.5
GYPB-208ENST00000507009 PGLSO95336 258 aa5.69□□□□□ -1.5
GYPB-208ENST00000507009 TIAF1O95411 115 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms