RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 FECHP22830 423 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 ME1P48163 572 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 MARSP56192 900 aaKnown RBP12.34□□□□□ -0.43
LSM6-204ENST00000504181 POLR2LP62875 67 aaKnown RBP12.34□□□□□ -0.43
LSM6-204ENST00000504181 BCL2L1Q07817 233 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 Q0VFX4 171 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 CDC16Q13042 620 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 KIR2DS5Q14953 304 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 RAB6CQ53S08 254 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 DCAF10Q5QP82 559 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 IRGCQ6NXR0 463 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 HSD11B1LQ7Z5J1 315 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 SRLQ86TD4 932 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 TMEM126BQ8IUX1 230 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 TBC1D31Q96DN5 1066 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 CFAP57Q96MR6 1250 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 ZNF396Q96N95 335 aaPredicted RBP12.34□□□□□ -0.43
LSM6-204ENST00000504181 SLX1AQ9BQ83 275 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 WDR77Q9BQA1 342 aaPredicted RBP12.34□□□□□ -0.43
LSM6-204ENST00000504181 RAB6CQ9H0N0 254 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 CD84Q9UIB8 345 aa12.34□□□□□ -0.43
LSM6-204ENST00000504181 IGHV5-51A0A0C4DH38 117 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 MASP2O00187 686 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 IPO13O94829 963 aaKnown RBP12.33□□□□□ -0.44
LSM6-204ENST00000504181 LRIG2O94898 1065 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 ASMTLO95671 621 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 SOD1P00441 154 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 MYL1P05976 194 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 KLK3P07288 261 aaPredicted RBP12.33□□□□□ -0.44
LSM6-204ENST00000504181 RAB40ALP0C0E4 278 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 ACP5P13686 325 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 TEAD1P28347 426 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 OTX2P32243 289 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 FLT3P36888 993 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 KIR3DL1P43629 444 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 PPP2R2AP63151 447 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 UBE2IP63279 158 aaKnown RBP12.33□□□□□ -0.44
LSM6-204ENST00000504181 NRG1Q02297 640 aaPredicted RBP12.33□□□□□ -0.44
LSM6-204ENST00000504181 LTBQ06643 244 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 FAM102AQ5T9C2 384 aaPredicted RBP12.33□□□□□ -0.44
LSM6-204ENST00000504181 TRNP1Q6NT89 227 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 RPTNQ6XPR3 784 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 CERS6Q6ZMG9 384 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 TMEM26Q6ZUK4 368 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 Q6ZVL8 140 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 RAB43Q86YS6 212 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 LZTR1Q8N653 840 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 SLC38A9Q8NBW4 561 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 CLEC1AQ8NC01 280 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 SHC3Q92529 594 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 ZNF514Q96K75 400 aaPredicted RBP12.33□□□□□ -0.44
LSM6-204ENST00000504181 PLEKHG4BQ96PX9 1271 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 NLNQ9BYT8 704 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 RETREG1Q9H6L5 497 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 SEMA3GQ9NS98 782 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 KCTD5Q9NXV2 234 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 SH3BGRL2Q9UJC5 107 aa12.33□□□□□ -0.44
LSM6-204ENST00000504181 HEXIM1O94992 359 aaKnown RBP12.32□□□□□ -0.44
LSM6-204ENST00000504181 TNFAIP3P21580 790 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 VIPR1P32241 457 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 USP8P40818 1118 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 TSFMP43897 325 aaKnown RBP12.32□□□□□ -0.44
LSM6-204ENST00000504181 CAPZBP47756 277 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 SNX16P57768 344 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 PPP1CAP62136 330 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 ATP11AP98196 1134 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 OTUD4Q01804 1114 aaKnown RBP12.32□□□□□ -0.44
LSM6-204ENST00000504181 CETN1Q12798 172 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
LSM6-204ENST00000504181 FAM180AQ6UWF9 173 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
LSM6-204ENST00000504181 BNIPLQ7Z465 357 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 TSEN2Q8NCE0 465 aaKnown RBP12.32□□□□□ -0.44
LSM6-204ENST00000504181 CNDP1Q96KN2 507 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 UCK1Q9HA47 277 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 UBE2TQ9NPD8 197 aaPredicted RBP12.32□□□□□ -0.44
LSM6-204ENST00000504181 PLCB1Q9NQ66 1216 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 OLAHQ9NV23 265 aa12.32□□□□□ -0.44
LSM6-204ENST00000504181 OR5K4A6NMS3 321 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 KIAA1324LA8MWY0 1029 aaPredicted RBP12.31□□□□□ -0.44
LSM6-204ENST00000504181 TRAFD1O14545 582 aaPredicted RBP12.31□□□□□ -0.44
LSM6-204ENST00000504181 PMM2O15305 246 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 KLHL41O60662 606 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 DNAJC6O75061 913 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 VIPP01282 170 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
LSM6-204ENST00000504181 LHCGRP22888 699 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 PBX1P40424 430 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 GSDMDP57764 484 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 FKBP3Q00688 224 aaKnown RBP12.31□□□□□ -0.44
LSM6-204ENST00000504181 ACY1Q03154 408 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 PAK1Q13153 545 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 ASIC2Q16515 512 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 CDO1Q16878 200 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 XKRXQ6PP77 449 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 FAM198BQ6UWH4 519 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 ADAMTSL4Q6UY14 1074 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 SPOCD1Q6ZMY3 1216 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 RFLNAQ6ZTI6 216 aa12.31□□□□□ -0.44
LSM6-204ENST00000504181 Q71RC1 249 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms