RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SAMD11Q96NU1 681 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 LRRC3BQ96PB8 259 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 TACO1Q9BSH4 297 aaKnown RBP21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 ASB8Q9H765 288 aa21.18■□□□□ 0.98
UBE2D3-216ENST00000503742 WASH3PC4AMC7 463 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 CDC7O00311 574 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 SLC9A3R1O14745 358 aaPredicted RBP21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 CHUKO15111 745 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 BNIP3LO60238 219 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 GM2AP17900 193 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 CHRM3P20309 590 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 ITGALP20701 1170 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 PGM1P36871 562 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 PPARGP37231 505 aaPredicted RBP21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 RAP1GDS1P52306 607 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 COPAP53621 1224 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 PTPN5P54829 565 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 TSNQ15631 228 aaKnown RBP21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 PFKFB4Q16877 469 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 GRAMD4Q6IC98 578 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 RAB44Q7Z6P3 723 aaPredicted RBP21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 ADGRD2Q7Z7M1 963 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 RBM23Q86U06 439 aaKnown RBP21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 AHI1Q8N157 1196 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 CCDC97Q96F63 343 aaPredicted RBP21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 LBHD1Q9BQE6 289 aaPredicted RBP21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 FBXO10Q9UK96 956 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 RNF112Q9ULX5 631 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 GLYATL1P3A0A0U1RQE8 302 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 TRIM24O15164 1050 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 SLC22A2O15244 555 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 KLK8O60259 260 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 ECI2O75521 394 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 PAPLNO95428 1278 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 ZNF7P17097 686 aaPredicted RBP21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 SPAM1P38567 509 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 INHBCP55103 352 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 IL2P60568 153 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 ERVK-21P61565 698 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 BTKQ06187 659 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 C9orf50Q5SZB4 431 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 UGT3A1Q6NUS8 523 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 Q6ZVU0 165 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 ARHGAP24Q8N264 748 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 AFAP1L2Q8N4X5 818 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 CHST14Q8NCH0 376 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 EEF1AKMT1Q8WVE0 214 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 ASB2Q96Q27 587 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 ZDHHC6Q9H6R6 413 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 MEAF6Q9HAF1 191 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 ERVW-1Q9UQF0 538 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 DHRS7Q9Y394 339 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 TRAF6Q9Y4K3 522 aa21.17■□□□□ 0.98
UBE2D3-216ENST00000503742 SYCE1LA8MT33 242 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 AGAP14A8MT82 685 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 IQCF5A8MTL0 148 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 E5RI56 91 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 SIX3O95343 332 aaPredicted RBP21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 CCND1P24385 295 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 ACRV1P26436 265 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 WEE1P30291 646 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 ADSLP30566 484 aaPredicted RBP21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 CHRNA6Q15825 494 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 USP45Q70EL2 814 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 RBFAQ8N0V3 343 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 CELF5Q8N6W0 485 aaKnown RBP21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 NAT16Q8N8M0 369 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 OR2A12Q8NGT7 310 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 LINGO1Q96FE5 620 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 PDLIM5Q96HC4 596 aaKnown RBP21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 MRGPRX3Q96LB0 322 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 CD248Q9HCU0 757 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 ATG2AQ2TAZ0 1938 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 A0A1W2PQ67 120 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 NPEPPSL1A6NEC2 478 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 A8MX80 341 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 PEX11AO75192 247 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 UGT2B4P06133 528 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 COX4I1P13073 169 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 GFAPP14136 432 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 GPR33Q49SQ1 333 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 LYPLAL1Q5VWZ2 237 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 LRRC66Q68CR7 880 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 CPNE9Q8IYJ1 553 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 KIAA1958Q8N8K9 716 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 ACTRT2Q8TDY3 377 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 SMG7Q92540 1137 aaKnown RBP21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 TTC1Q99614 292 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 BOCQ9BWV1 1114 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 CLPBQ9H078 707 aa21.16■□□□□ 0.98
UBE2D3-216ENST00000503742 LAMA3Q16787 3333 aa21.15■□□□□ 0.98
UBE2D3-216ENST00000503742 PRRC2BQ5JSZ5 2229 aaKnown RBP21.15■□□□□ 0.98
UBE2D3-216ENST00000503742 LRRC14BA6NHZ5 514 aa21.15■□□□□ 0.98
UBE2D3-216ENST00000503742 MEI4A8MW99 385 aa21.15■□□□□ 0.98
UBE2D3-216ENST00000503742 SUPT3HB4E1H0 165 aa21.15■□□□□ 0.98
UBE2D3-216ENST00000503742 BTN3A1O00481 513 aa21.15■□□□□ 0.98
UBE2D3-216ENST00000503742 SUPT3HO75486 399 aa21.15■□□□□ 0.98
UBE2D3-216ENST00000503742 TM7SF2O76062 418 aa21.15■□□□□ 0.98
UBE2D3-216ENST00000503742 CHRM1P11229 460 aaPredicted RBP21.15■□□□□ 0.98
UBE2D3-216ENST00000503742 TSPAN8P19075 237 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms