RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	CCDC74A	Q96AQ1	378 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	QKI	Q96PU8	341 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	SMIM14	Q96QK8	99 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	CCDC3	Q9BQI4	270 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	RIOK2	Q9BVS4	552 aa	Known RBP	10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	LGR4	Q9BXB1	951 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	SPATA16	Q9BXB7	569 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	TMEM168	Q9H0V1	697 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	ABCG8	Q9H221	673 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	GLOD4	Q9HC38	313 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	RAD18	Q9NS91	495 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	UBP1	Q9NZI7	540 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	SUFU	Q9UMX1	484 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	SHOC2	Q9UQ13	582 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	ZNF711	Q9Y462	761 aa		10.61	□□□□□ -0.71
CDK11A-222	ENST00000498810	FRY	Q5TBA9	3013 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	EME2	A4GXA9	379 aa	Predicted RBP	10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	SRRM3	A6NNA2	597 aa	Predicted RBP	10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	BTNL10	A8MVZ5	291 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	HACD1	B0YJ81	288 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	APOC4-APOC2	K7ER74	178 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	ZW10	O43264	779 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	TJP3	O95049	919 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	MT-CYB	P00156	380 aa	Predicted RBP	10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	APOC2	P02655	101 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	EPX	P11678	715 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	GM2A	P17900	193 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	TRIM23	P36406	574 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	ACTR1B	P42025	376 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	ACTR1A	P61163	376 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	DPT	Q07507	201 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	PRPSAP1	Q14558	356 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	C3orf38	Q5JPI3	329 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	PERM1	Q5SV97	790 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	DARS2	Q6PI48	645 aa	Known RBP	10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	ADAMTSL4	Q6UY14	1074 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	LRRC69	Q6ZNQ3	347 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	BBS12	Q6ZW61	710 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	PELI3	Q8N2H9	469 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	IPMK	Q8NFU5	416 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	SPATA22	Q8NHS9	363 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	IMP4	Q96G21	291 aa	Known RBP	10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	HIC2	Q96JB3	615 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	OR2M4	Q96R27	311 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	GFM1	Q96RP9	751 aa	Known RBP	10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	SRPK1	Q96SB4	655 aa	Known RBP	10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	VAT1	Q99536	393 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	TEX101	Q9BY14	249 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	TSGA10	Q9BZW7	698 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	FAM83D	Q9H4H8	585 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	STN1	Q9H668	368 aa	Known RBP	10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	ZFYVE1	Q9HBF4	777 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	FAM153A	Q9UHL3	310 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	PPIL1	Q9Y3C6	166 aa		10.6	□□□□□ -0.71
CDK11A-222	ENST00000498810	EPG5	Q9HCE0	2579 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	LY6G6E	A0A0G2JKS1	128 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	SERTM1	A2A2V5	107 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	RHPN2P1	A8MT19	583 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	MIF4GD	A9UHW6	222 aa	Known RBP	10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	PJA2	O43164	708 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	KRT86	O43790	486 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	USP12	O75317	370 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	TCEA3	O75764	348 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	ZNF189	O75820	626 aa	Predicted RBP	10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	KRT37	O76014	449 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	NDST3	O95803	873 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	FTCD	O95954	541 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	IGHA1	P01876	353 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	RPLP0	P05388	317 aa	Known RBP	10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	MMP2	P08253	660 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	CD33	P20138	364 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	TEAD1	P28347	426 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	ACTN2	P35609	894 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	POLD2	P49005	469 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	SPINT3	P49223	89 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	EIF3E	P60228	445 aa	Known RBP	10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	GABRE	P78334	506 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	OTUD4	Q01804	1114 aa	Known RBP	10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	NOMO1	Q15155	1222 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	SLC14A2	Q15849	920 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	MAP9	Q49MG5	647 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	C14orf28	Q4W4Y0	310 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	FAM182A	Q5T1J6	154 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	SEL1L2	Q5TEA6	688 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	GLT6D1	Q7Z4J2	308 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	TECPR1	Q7Z6L1	1165 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	PHYKPL	Q8IUZ5	450 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	CCNJL	Q8IV13	435 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	SLC25A41	Q8N5S1	370 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	CNTD1	Q8N815	330 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	DCBLD1	Q8N8Z6	715 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810		Q8N9G6	341 aa	Predicted RBP	10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	GDAP1	Q8TB36	358 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	BLOC1S5	Q8TDH9	187 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	TEKT5	Q96M29	485 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	LYSMD1	Q96S90	227 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	FRMD8	Q9BZ67	464 aa	Predicted RBP	10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	OSBPL8	Q9BZF1	889 aa		10.59	□□□□□ -0.71
CDK11A-222	ENST00000498810	STRADB	Q9C0K7	418 aa		10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms