RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TEAD1P28347 426 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 SOX5P35711 763 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 GARSP41250 739 aaKnown RBP9.01□□□□□ -0.97
CCDC171-209ENST00000498725 PTGIRP43119 386 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 EPHB1P54762 984 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 AIF1P55008 147 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 DPTQ07507 201 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 ITKQ08881 620 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 RAPSNQ13702 412 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 LRP8Q14114 963 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 KCNAB1Q14722 419 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 SEPT7Q16181 437 aaKnown RBP9.01□□□□□ -0.97
CCDC171-209ENST00000498725 ARMC12Q5T9G4 340 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 CROCCQ5TZA2 2017 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 CACHD1Q5VU97 1274 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 C1QL3Q5VWW1 255 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 IRGCQ6NXR0 463 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 JMJD6Q6NYC1 403 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-209ENST00000498725 TRIM72Q6ZMU5 477 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 RFX8Q6ZV50 586 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 MON1BQ7L1V2 547 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 APLFQ8IW19 511 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-209ENST00000498725 EXD1Q8NHP7 514 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 SCRN2Q96FV2 425 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 PLEKHG4BQ96PX9 1271 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 PEBP4Q96S96 227 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 ING2Q9H160 280 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 GANQ9H2C0 597 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 ZNF768Q9H5H4 540 aaKnown RBP9.01□□□□□ -0.97
CCDC171-209ENST00000498725 NT5MQ9NPB1 228 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 LHX9Q9NQ69 397 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 FAM207AQ9NSI2 230 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-209ENST00000498725 DONSONQ9NYP3 566 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 SCHIP1Q9P0W5 487 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-209ENST00000498725 SIK3Q9Y2K2 1263 aa9.01□□□□□ -0.97
CCDC171-209ENST00000498725 KIR2DS5A0A0G2JLQ3 304 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 A0A0G2JNG1 304 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 A0A1W2PQ67 120 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 ARHGAP10A1A4S6 786 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 F5H423 210 aaPredicted RBP9□□□□□ -0.97
CCDC171-209ENST00000498725 KIR2DS3K7RE56 304 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 EPHB6O15197 1021 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 KRT38O76015 456 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 CLDN7O95471 211 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 LDLRP01130 860 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 VIPP01282 170 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 C9P02748 559 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 ANKRD34CP0C6C1 535 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 SLC2A4P14672 509 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 PSMA2P25787 234 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 ELAVL4P26378 380 aaKnown RBP9□□□□□ -0.97
CCDC171-209ENST00000498725 HTR7P34969 479 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 PTSQ03393 145 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 IL10RAQ13651 578 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 IL11RAQ14626 422 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 KIR2DS5Q14953 304 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 CHRNA6Q15825 494 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 UGT8Q16880 541 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 TDRD12Q587J7 1177 aaKnown RBP9□□□□□ -0.97
CCDC171-209ENST00000498725 ERMARDQ5T6L9 678 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 SMYD5Q6GMV2 418 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 CRTC3Q6UUV7 619 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 PPP1R3BQ86XI6 285 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 PHF13Q86YI8 300 aaPredicted RBP9□□□□□ -0.97
CCDC171-209ENST00000498725 PHYKPLQ8IUZ5 450 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 RSC1A1Q92681 617 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 COX14Q96I36 57 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 PCMTD1Q96MG8 357 aaPredicted RBP9□□□□□ -0.97
CCDC171-209ENST00000498725 C5orf34Q96MH7 638 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 HERPUD2Q9BSE4 406 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 SAMSN1Q9NSI8 373 aaKnown RBP9□□□□□ -0.97
CCDC171-209ENST00000498725 KLC4Q9NSK0 619 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 TRIM10Q9UDY6 481 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 DNAJC16Q9Y2G8 782 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 ZNF451Q9Y4E5 1061 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 PCDHGA6Q9Y5G7 932 aa9□□□□□ -0.97
CCDC171-209ENST00000498725 TCRBV5S1A1TA0A578 114 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 LILRA5A6NI73 299 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 PDZK1P1A8MUH7 402 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 FADS2P1A8MWK0 482 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 TMCO5BA8MYB1 307 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 GRID2O43424 1007 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 DPM1O60762 260 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 LRCH4O75427 683 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 MT-ND3P03897 115 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 FGF5P12034 268 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 AMPD1P23109 780 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 PTPN4P29074 926 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 MMP13P45452 471 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 GSCP56915 257 aaPredicted RBP8.99□□□□□ -0.97
CCDC171-209ENST00000498725 PPP1CAP62136 330 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 RPS15P62841 145 aaKnown RBP8.99□□□□□ -0.97
CCDC171-209ENST00000498725 TUBB3Q13509 450 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 KYNUQ16719 465 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 INSCQ1MX18 579 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 FAM69BQ5VUD6 431 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 SLC6A19Q695T7 634 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 PWWP2BQ6NUJ5 590 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 CERS6Q6ZMG9 384 aa8.99□□□□□ -0.97
CCDC171-209ENST00000498725 TMEM26Q6ZUK4 368 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms