RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 APOOQ9BUR5 198 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 LRRC4CQ9HCJ2 640 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 SMOXQ9NWM0 555 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 ZFATQ9P243 1243 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 SUSD2Q9UGT4 822 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 HCN4Q9Y3Q4 1203 aa13.46□□□□□ -0.25
CPNE1-227ENST00000498056 ERLIN1O75477 346 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 SLC25A14O95258 325 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-227ENST00000498056 ASMTLO95671 621 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 CFIP05156 583 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 GSTA2P09210 222 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 GNSP15586 552 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 OGNP20774 298 aaKnown RBP13.45□□□□□ -0.26
CPNE1-227ENST00000498056 ACRV1P26436 265 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 TEAD1P28347 426 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 CD38P28907 300 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 PMLP29590 882 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 CA5AP35218 305 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 RABIFP47224 123 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 AFF3P51826 1226 aaKnown RBP13.45□□□□□ -0.26
CPNE1-227ENST00000498056 KIAA1024LP59773 190 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 PFN3P60673 137 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 MGAT5Q09328 741 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 NFATC4Q14934 902 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 TEAD4Q15561 434 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 DBN1Q16643 649 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 GPR33Q49SQ1 333 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 ZNF648Q5T619 568 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-227ENST00000498056 NEPROQ6NW34 567 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 Q6ZSR6 202 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 C3orf62Q6ZUJ4 267 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 TRMT10CQ7L0Y3 403 aaKnown RBP13.45□□□□□ -0.26
CPNE1-227ENST00000498056 SERPINA9Q86WD7 417 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 PIANPQ8IYJ0 282 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 SLC22A18ASQ8N1D0 253 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 NXPE1Q8N323 547 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 PNPLA1Q8N8W4 532 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 DDHD1Q8NEL9 900 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 CALML6Q8TD86 181 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 FBF1Q8TES7 1133 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 BTN2A2Q8WVV5 523 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 CDKL2Q92772 493 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 FUBP1Q96AE4 644 aaKnown RBP13.45□□□□□ -0.26
CPNE1-227ENST00000498056 BMFQ96LC9 184 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 LGR4Q9BXB1 951 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 ZCCHC2Q9C0B9 1178 aaKnown RBP13.45□□□□□ -0.26
CPNE1-227ENST00000498056 SEMA4AQ9H3S1 761 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 MOSPD1Q9UJG1 213 aa13.45□□□□□ -0.26
CPNE1-227ENST00000498056 OAS3Q9Y6K5 1087 aaKnown RBP13.45□□□□□ -0.26
CPNE1-227ENST00000498056 VPS13AQ96RL7 3174 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 UQCRHLA0A096LP55 91 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 TRBV5-4A0A0C4DH59 114 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 A0A1B0GTW7 788 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 UBA6A0AVT1 1052 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-227ENST00000498056 RIPK2O43353 540 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 EPN2O95208 641 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 UQCRHP07919 91 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 HTR1BP28222 390 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 TTPAP49638 278 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 C21orf59P57076 290 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 MPP1Q00013 466 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 GTF2H3Q13889 308 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 KHDC1Q4VXA5 237 aaKnown RBP13.44□□□□□ -0.26
CPNE1-227ENST00000498056 LDLRAP1Q5SW96 308 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 MACC1Q6ZN28 852 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 MARK2Q7KZI7 788 aaKnown RBP13.44□□□□□ -0.26
CPNE1-227ENST00000498056 DET1Q7L5Y6 550 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 NLRP8Q86W28 1048 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 CILP2Q8IUL8 1156 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 SYT12Q8IV01 421 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 DENND6AQ8IWF6 608 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 CTAGE3PQ8IX95 158 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 CAVIN3Q969G5 261 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 CCDC97Q96F63 343 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-227ENST00000498056 KLHDC7BQ96G42 594 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 PDXPQ96GD0 296 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 DCUN1D1Q96GG9 259 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 WDR92Q96MX6 357 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 TTC1Q99614 292 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 COPS8Q99627 209 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 TEX101Q9BY14 249 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 FBXO6Q9NRD1 293 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-227ENST00000498056 TMEM74BQ9NUR3 256 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 PILRBQ9UKJ0 227 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 TMPRSS11EQ9UL52 423 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 HS3ST3A1Q9Y663 406 aa13.44□□□□□ -0.26
CPNE1-227ENST00000498056 ARHGEF17Q96PE2 2063 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-227ENST00000498056 A0A087WUV0 522 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-227ENST00000498056 A0A1W2PR77 199 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 CCDC151A5D8V7 595 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 PRR5-ARHGAP8B1AHC4 643 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 CFAP99D6REC4 459 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 SCAMP1O15126 338 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 PFDN6O15212 129 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 NDUFS3O75489 264 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 PIAS1O75925 651 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 WNT1P04628 370 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 RALBP11234 206 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 MSH3P20585 1137 aa13.43□□□□□ -0.26
CPNE1-227ENST00000498056 KELP23276 732 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms