RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FCGR2AP12318 317 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 GATA3P23771 443 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 CCNCP24863 283 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 NDUFS1P28331 727 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 CCND2P30279 289 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 TIA1P31483 386 aaKnown RBP eCLIP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 LIMS1P48059 325 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 GPR143P51810 404 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 PTENP60484 403 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 SIRPAP78324 504 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 KLF10Q13118 480 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 CHIT1Q13231 466 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 SMN1Q16637 294 aaKnown RBP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 KRT24Q2M2I5 525 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ZXDCQ2QGD7 858 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 RNASEH2BQ5TBB1 312 aaKnown RBP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 KLHL10Q6JEL2 608 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ARHGAP11AQ6P4F7 1023 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 TOM1L2Q6ZVM7 507 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 INTS8Q75QN2 995 aaKnown RBP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ARMCX2Q7L311 632 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 PLEKHH3Q7Z736 793 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ZNF410Q86VK4 478 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 SERPINA12Q8IW75 414 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ZNF595Q8IYB9 648 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ELOA2Q8IYF1 753 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 MDGA1Q8NFP4 955 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 OR14L1PQ8NHC6 308 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 RNASE8Q8TDE3 154 aaKnown RBP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 TRPC4APQ8TEL6 797 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 MZB1Q8WU39 189 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 CHURC1Q8WUH1 139 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 HEXDCQ8WVB3 486 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ST6GALNAC6Q969X2 333 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 NXNL1Q96CM4 212 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 CLMNQ96JQ2 1002 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 SEMA3CQ99985 751 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 NMRK1Q9NWW6 199 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 GRHL1Q9NZI5 618 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ANKMY1Q9P2S6 941 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 COPG2Q9UBF2 871 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 CLIP2Q9UDT6 1046 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 RAPGEFL1Q9UHV5 662 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 SLC24A2Q9UI40 661 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 KCNE5Q9UJ90 142 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ASB3Q9Y575 518 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 SNX9Q9Y5X1 595 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ATP10AO60312 1499 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 CAMSAP2Q08AD1 1489 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 MBD5Q9P267 1494 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 C9orf84Q5VXU9 1444 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 KIAA1107Q9UPP5 1409 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 INO80Q9ULG1 1556 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 TRBV2A0A0J9YWF9 115 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 TMEM247A6NEH6 219 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 H0YC42 278 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 LEFTY2O00292 366 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 TTI1O43156 1089 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 NME6O75414 186 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 SPAG6O75602 509 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 HLA-DQA2P01906 255 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 PLA2G1BP04054 148 aaKnown RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 ENO1P06733 434 aaKnown RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 SLC16A2P36021 539 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 CD97P48960 835 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 E2F1Q01094 437 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 GCNT1Q02742 428 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 GRIK3Q13003 919 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 CUL2Q13617 745 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 KARSQ15046 597 aaKnown RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 CDO1Q16878 200 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 USP41Q3LFD5 358 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 GLE1Q53GS7 698 aaKnown RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 RABL3Q5HYI8 236 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 C6orf141Q5SZD1 244 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 LRRC8EQ6NSJ5 796 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 ANKRD16Q6P6B7 361 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 AFTPHQ6ULP2 937 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 QSOX2Q6ZRP7 698 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 OTUD6AQ7L8S5 288 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 TBC1D26Q86UD7 250 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 EXOC3L1Q86VI1 746 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 SIAH3Q8IW03 269 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 FAM219AQ8IW50 185 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 CCDC83Q8IWF9 413 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 BANPQ8N9N5 519 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 EXOC6Q8TAG9 804 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 XAGE5Q8WWM1 108 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 THRSPQ92748 146 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 KAT2AQ92830 837 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 SNRNP40Q96DI7 357 aaKnown RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 KIRREL1Q96J84 757 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 SNX18Q96RF0 628 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 TMEM47Q9BQJ4 181 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 ZPBPQ9BS86 351 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 CCSER1Q9C0I3 900 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 PPIL3Q9H2H8 161 aaKnown RBP6.06□□□□□ -1.44
BRCA1-224ENST00000497488 RIBC2Q9H4K1 309 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 MINDY3Q9H8M7 445 aa6.06□□□□□ -1.44
BRCA1-224ENST00000497488 EPB41L5Q9HCM4 733 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms