RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 HNRNPLP14866 589 aaKnown RBP eCLIP13.57□□□□□ -0.245e-9■■■□□ 16.2
SPTBN1-205ENST00000496323 TIMP2P16035 220 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 CHRM3P20309 590 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 NFKB2Q00653 900 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 PRKAA1Q13131 559 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 TREML1Q86YW5 311 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 KIAA1191Q96A73 305 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 KLHL29Q96CT2 875 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 PTCD3Q96EY7 689 aaKnown RBP13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 CNDP1Q96KN2 507 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 PLA2G2FQ9BZM2 168 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 ARHGEF3Q9NR81 526 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 IL36AQ9UHA7 158 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 COMMD10Q9Y6G5 202 aa13.57□□□□□ -0.24
SPTBN1-205ENST00000496323 UBXN8O00124 270 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 CDC7O00311 574 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 GRID2O43424 1007 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 SERPINA6P08185 405 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 IMPDH1P20839 514 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.246e-10■□□□□ 9.9
SPTBN1-205ENST00000496323 PTPN5P54829 565 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 ALDH18A1P54886 795 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 POLR2LP62875 67 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 KRT72Q14CN4 511 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 SLC9B1Q4ZJI4 515 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 SLC22A9Q8IVM8 553 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 PHTF2Q8N3S3 785 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 CLDN19Q8N6F1 224 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 KDM1BQ8NB78 822 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 EEF1AKMT1Q8WVE0 214 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 NSUN3Q9H649 340 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 ZFP14Q9HCL3 533 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 TNFRSF12AQ9NP84 129 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 DEC1Q9P2X7 70 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 TRMT6Q9UJA5 497 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 CEP290O15078 2479 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 F8W8V4 182 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 DIAPH2O60879 1101 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 ATP5HO75947 161 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 ZNF7P17097 686 aaPredicted RBP13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 SERPINB5P36952 375 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 SPINT3P49223 89 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 ATP6V0D1P61421 351 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 KDSRQ06136 332 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 FCHO2Q0JRZ9 810 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 PDGFRLQ15198 375 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 TSNQ15631 228 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 POM121L1PQ3SYA9 428 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 GPR33Q49SQ1 333 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 CFAP157Q5JU67 520 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 CPNE9Q8IYJ1 553 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 RBFAQ8N0V3 343 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 NXPE1Q8N323 547 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 NKAPQ8N5F7 415 aaKnown RBP13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 LKAAEAR1Q8TD35 194 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 PPM1EQ8WY54 764 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 EXT2Q93063 718 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 PBXIP1Q96AQ6 731 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 L3HYPDHQ96EM0 354 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 MYADMQ96S97 322 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 GSTO2Q9H4Y5 243 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 PCDH12Q9NPG4 1184 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 PLA2G4CQ9UP65 541 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 SLC8A2Q9UPR5 921 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 PCDHB1Q9Y5F3 818 aa13.56□□□□□ -0.24
SPTBN1-205ENST00000496323 UNC80Q8N2C7 3258 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 TMEM233B4DJY2 109 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 H0YHG0 523 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 CCDC22O60826 627 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 KERAO60938 352 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 JUNP05412 331 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 TPBGLP0DKB5 382 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 UBAP2LQ14157 1087 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 ATP13A5Q4VNC0 1218 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 UNC50Q53HI1 259 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 ZNF678Q5SXM1 525 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 PTGR2Q8N8N7 351 aaPredicted RBP13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 FUBP1Q96AE4 644 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 TIFAQ96CG3 184 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 CHFRQ96EP1 664 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 CCDC106Q9BWC9 280 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 CLPBQ9H078 707 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 LRMDAQ9H2I8 198 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 SLC40A1Q9NP59 571 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 SARS2Q9NP81 518 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 THG1LQ9NWX6 298 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 CLEC1BQ9P126 229 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 TMPRSS11EQ9UL52 423 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 APOBEC2Q9Y235 224 aaKnown RBP13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 DHRS7Q9Y394 339 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 NPEPPSL1A6NEC2 478 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 ANTXRLA6NF34 631 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 CFAP73A6NFT4 308 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 CCDC85CA6NKD9 419 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 E5RI56 91 aa13.55□□□□□ -0.24
SPTBN1-205ENST00000496323 UBFD1O14562 309 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms