RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 HGFP14210 728 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 NCF1P14598 390 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 EPHB3P54753 998 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 RHDQ02161 417 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 CACNG1Q06432 222 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 PABPC1LQ4VXU2 614 aaKnown RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 CTSL3PQ5NE16 218 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 C8orf82Q6P1X6 216 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 LAYNQ6UX15 382 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 CERS6Q6ZMG9 384 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 DNAJB7Q7Z6W7 309 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 PHYKPLQ8IUZ5 450 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 FUNDC1Q8IVP5 155 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 TTC30BQ8N4P2 665 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 SIDT2Q8NBJ9 832 aaKnown RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 OR56A4Q8NGH8 313 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 CD200R1Q8TD46 325 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 WBP2Q969T9 261 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 PBXIP1Q96AQ6 731 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 LINGO1Q96FE5 620 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 GCNAQ96QF7 691 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 KCNA7Q96RP8 456 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 FEM1AQ9BSK4 669 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 GPR63Q9BZJ6 419 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 LHX3Q9UBR4 397 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 CD300AQ9UGN4 299 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 POLG2Q9UHN1 485 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 FNDC3AQ9Y2H6 1198 aaKnown RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 AP4S1Q9Y587 144 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 PCDHB9Q9Y5E1 797 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 NR5A2O00482 541 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 DENRO43583 198 aaKnown RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 FZD6O60353 706 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 OR1I1O60431 355 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 ESRRBO95718 433 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 LINC00032P0C843 101 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 UROSP10746 265 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 PIM1P11309 404 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 MZF1P28698 734 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 HMGCLP35914 325 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 AP1S1P61966 158 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 PDK3Q15120 406 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 COQ5Q5HYK3 327 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 ARMC12Q5T9G4 340 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 RNF220Q5VTB9 566 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 OGFOD2Q6N063 350 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 SPATA19Q7Z5L4 167 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 GPSM1Q86YR5 675 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 DCAF4L2Q8NA75 395 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 ZNF483Q8TF39 744 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 ZNF558Q96NG5 402 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 SMIM14Q96QK8 99 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 CCT7Q99832 543 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 PKP2Q99959 881 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 HGH1Q9BTY7 390 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 EFHD1Q9BUP0 239 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 PCDHAC1Q9H158 963 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 TUBB1Q9H4B7 451 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 MAGEE1Q9HCI5 957 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 SDR39U1Q9NRG7 319 aaPredicted RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 GID8Q9NWU2 228 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 CD274Q9NZQ7 290 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 IKZF3Q9UKT9 509 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 CNOT11Q9UKZ1 510 aaKnown RBP10.99□□□□□ -0.65
CMSS1-208ENST00000496116 ZNF711Q9Y462 761 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 ASB3Q9Y575 518 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 PCDHB1Q9Y5F3 818 aa10.99□□□□□ -0.65
CMSS1-208ENST00000496116 TSPAN12O95859 305 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 URODP06132 367 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 SLC7A2P52569 658 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 CHN2P52757 468 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 RALGDSQ12967 914 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 GRIK2Q13002 908 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 RAB33AQ14088 237 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 GRB7Q14451 532 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 RBBP7Q16576 425 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 ITIH5Q86UX2 942 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 LILRA2Q8N149 483 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 MARVELD2Q8N4S9 558 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 SNX31Q8N9S9 440 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 TSPEARQ8WU66 669 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 EEF1AKMT1Q8WVE0 214 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 ATP6V1E2Q96A05 226 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 SLC30A3Q99726 388 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 CENPKQ9BS16 269 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 C2orf49Q9BVC5 232 aaPredicted RBP10.98□□□□□ -0.65
CMSS1-208ENST00000496116 HERC2P3Q9BVR0 1158 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 SARS2Q9NP81 518 aaKnown RBP10.98□□□□□ -0.65
CMSS1-208ENST00000496116 IL17CQ9P0M4 197 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 GALPQ9UBC7 116 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 VPS51Q9UID3 782 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 PCTPQ9UKL6 214 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 BTRCQ9Y297 605 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 FCF1Q9Y324 198 aaKnown RBP10.98□□□□□ -0.65
CMSS1-208ENST00000496116 PTGDR2Q9Y5Y4 395 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 PLXNA4Q9HCM2 1894 aa10.98□□□□□ -0.65
CMSS1-208ENST00000496116 PRMT5O14744 637 aaPredicted RBP10.97□□□□□ -0.65
CMSS1-208ENST00000496116 KIF3CO14782 793 aa10.97□□□□□ -0.65
CMSS1-208ENST00000496116 CAPNS1P04632 268 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms