RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ANKRD23Q86SG2 305 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 STAG3L4Q8TBR4 150 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 TEX37Q96LM6 180 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 ACTR8Q9H981 624 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 GID8Q9NWU2 228 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 PRPF19Q9UMS4 504 aaKnown RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 LINC00854A0A1B0GVQ3 168 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 TBL1XO60907 577 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 S1PR4O95977 384 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 ATP5C1P36542 298 aaKnown RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 HTR6P50406 440 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 RAB27AP51159 221 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 SMAD3P84022 425 aaKnown RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 HNRNPDQ14103 355 aaKnown RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 CHSY3Q70JA7 882 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 SLC22A9Q8IVM8 553 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 MFN1Q8IWA4 741 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 C2CD4AQ8NCU7 369 aaPredicted RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 BBS2Q9BXC9 721 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 CLPBQ9H078 707 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 UNC93B1Q9H1C4 597 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 FBXO44Q9H4M3 255 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 NSUN3Q9H649 340 aaKnown RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 STN1Q9H668 368 aaKnown RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 AMBNQ9NP70 447 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 POLR3BQ9NW08 1133 aaPredicted RBP13.37□□□□□ -0.27
GPC1-209ENST00000495100 CDC14AQ9UNH5 594 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 PTPRFP10586 1907 aa13.37□□□□□ -0.27
GPC1-209ENST00000495100 A0A0U1RQF3 1178 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 SYCE1LA8MT33 242 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 J3QRK9 145 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 ARVCFO00192 962 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 ADAM12O43184 909 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 HS6ST1O60243 411 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 ITPKAP23677 461 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 ARCN1P48444 511 aaKnown RBP13.36□□□□□ -0.27
GPC1-209ENST00000495100 IL2P60568 153 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 GNA12Q03113 381 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 VAC14Q08AM6 782 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 PGM2L1Q6PCE3 622 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 BNIPLQ7Z465 357 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 PGBD5Q8N414 524 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 OR10A6Q8NH74 314 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 FBXL8Q96CD0 374 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 NSMCE2Q96MF7 247 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 MYOCQ99972 504 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 ZBED2Q9BTP6 218 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 C1QTNF1Q9BXJ1 281 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 CIPCQ9C0C6 399 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 CRISPLD1Q9H336 500 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 GALNT8Q9NY28 637 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 BAG5Q9UL15 447 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 PCDHGA7Q9Y5G6 932 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 RPL9P32969 192 aaKnown RBP13.36□□□□□ -0.27
GPC1-209ENST00000495100 DYNC1I2Q13409 638 aaKnown RBP13.36□□□□□ -0.27
GPC1-209ENST00000495100 SPIDRQ14159 915 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 KIAA0930Q6ICG6 404 aaPredicted RBP13.36□□□□□ -0.27
GPC1-209ENST00000495100 B3GNT6Q6ZMB0 384 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 ZC3H15Q8WU90 426 aaKnown RBP13.36□□□□□ -0.27
GPC1-209ENST00000495100 DGCR14Q96DF8 476 aaKnown RBP13.36□□□□□ -0.27
GPC1-209ENST00000495100 PCDH12Q9NPG4 1184 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 RRN3Q9NYV6 651 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 ASB1Q9Y576 335 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 LOXHD1Q8IVV2 1947 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 HHLA1C9JL84 531 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 PRKAA2P54646 552 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 OCA2Q04671 838 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 SIM2Q14190 667 aaPredicted RBP13.36□□□□□ -0.27
GPC1-209ENST00000495100 SF1Q15637 639 aaKnown RBP13.36□□□□□ -0.27
GPC1-209ENST00000495100 CATSPER1Q8NEC5 780 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 CCDC126Q96EE4 140 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 ZDHHC4Q9NPG8 344 aa13.36□□□□□ -0.27
GPC1-209ENST00000495100 AP3B1O00203 1094 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 NME4O00746 187 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 DUSP11O75319 330 aaKnown RBP13.35□□□□□ -0.27
GPC1-209ENST00000495100 SNAP29O95721 258 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 IKBKEQ14164 716 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 OGFOD2Q6N063 350 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 FAM180BQ6P0A1 224 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 RNF175Q8N4F7 328 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 PSD4Q8NDX1 1056 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 BOCQ9BWV1 1114 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 POLG2Q9UHN1 485 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 FADS3Q9Y5Q0 445 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 TYW5A2RUC4 315 aaKnown RBP13.35□□□□□ -0.27
GPC1-209ENST00000495100 MZF1P28698 734 aaPredicted RBP13.35□□□□□ -0.27
GPC1-209ENST00000495100 CCR3P51677 355 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 PRKCQQ04759 706 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 PAGE3Q5JUK9 113 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 RTP2Q5QGT7 225 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 ZNF678Q5SXM1 525 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 ZFP1Q6P2D0 407 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 RDH11Q8TC12 318 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 NT5C3BQ969T7 300 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 BTN2A3PQ96KV6 586 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 ZBTB18Q99592 522 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 EBPLQ9BY08 206 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 PRR23AA6NEV1 266 aa13.35□□□□□ -0.27
GPC1-209ENST00000495100 SCAMP1O15126 338 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms