RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 AMBRA1Q9C0C7 1298 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 SACM1LQ9NTJ5 587 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 AIG1Q9NVV5 245 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 DAPK2Q9UIK4 370 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 MRPL42Q9Y6G3 142 aaKnown RBP15.28■□□□□ 0.04
SDF4-207ENST00000494748 CLDN25C9JDP6 229 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 NFKBIEO00221 500 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 UGT2B11O75310 529 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 E2F6O75461 281 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 FDXRP22570 491 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 NR4A1P22736 598 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 HOXC13P31276 330 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 GRIK4Q16099 956 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 FUT11Q495W5 492 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 SV2CQ496J9 727 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 MANEALQ5VSG8 457 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 AFMIDQ63HM1 303 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 RBM23Q86U06 439 aaKnown RBP15.27■□□□□ 0.04
SDF4-207ENST00000494748 ATPAF2Q8N5M1 289 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 ARRDC4Q8NCT1 418 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 HDAC2Q92769 488 aaKnown RBP15.27■□□□□ 0.04
SDF4-207ENST00000494748 SCUBE2Q9NQ36 999 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 ATAD3AQ9NVI7 634 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 OSER1Q9NX31 292 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 GPC6Q9Y625 555 aaPredicted RBP15.27■□□□□ 0.04
SDF4-207ENST00000494748 NLRC5Q86WI3 1866 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 PEX11BO96011 259 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 PIGAP37287 484 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 TMED10P49755 219 aaKnown RBP15.27■□□□□ 0.04
SDF4-207ENST00000494748 EMX2Q04743 252 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 TMEM199Q8N511 208 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 TUBGCP3Q96CW5 907 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 ATOH8Q96SQ7 321 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 RBPJLQ9UBG7 517 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 PMF1-BGLAPU3KQ54 211 aa15.27■□□□□ 0.04
SDF4-207ENST00000494748 MROH6A6NGR9 719 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 IGLV3-25P01717 112 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 THRBP10828 461 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 UFM1P61960 85 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 ZNF846Q147U1 533 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 GEN1Q17RS7 908 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 AGAP7PQ5VUJ5 663 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 ANKRD34AQ69YU3 496 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 THAP5Q7Z6K1 395 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 NAT16Q8N8M0 369 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 PPTC7Q8NI37 304 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 ZFP90Q8TF47 636 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 MPHOSPH6Q99547 160 aaKnown RBP15.27■□□□□ 0.03
SDF4-207ENST00000494748 FSD1LQ9BXM9 530 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 BRINP2Q9C0B6 783 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 TOR3AQ9H497 397 aa15.27■□□□□ 0.03
SDF4-207ENST00000494748 OR51F1A6NGY5 319 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 CDH1P12830 882 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 ACVR2AP27037 513 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 WNT3AP56704 352 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 INAVAQ3KP66 663 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 XKR7Q5GH72 579 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 DLK2Q6UY11 383 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 ARMCX2Q7L311 632 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 ANKRD13BQ86YJ7 626 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 SCAIQ8N9R8 606 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 TRPM4Q8TD43 1214 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 VMP1Q96GC9 406 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 RNF145Q96MT1 663 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 MED10Q9BTT4 135 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 BEGAINQ9BUH8 593 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 BDH2Q9BUT1 245 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 ALOXE3Q9BYJ1 711 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 ATP13A3Q9H7F0 1226 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 ZNF225Q9UK10 706 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 IKZF3Q9UKT9 509 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 TRIP12Q14669 1992 aaPredicted RBP15.26■□□□□ 0.03
SDF4-207ENST00000494748 OXSR1O95747 527 aaPredicted RBP15.26■□□□□ 0.03
SDF4-207ENST00000494748 F9P00740 461 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 CCNA1P78396 465 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 SELPLGQ14242 412 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 UBXN11Q5T124 520 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 NOTUMQ6P988 496 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 CRTC3Q6UUV7 619 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 OR2T11Q8NH01 316 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 CALML6Q8TD86 181 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 EXT2Q93063 718 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 ASB2Q96Q27 587 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 FAM118AQ9NWS6 357 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 SUOXP51687 545 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 RAD23AP54725 363 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 GABARAPL2P60520 117 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 CCDC92Q53HC0 331 aaPredicted RBP15.26■□□□□ 0.03
SDF4-207ENST00000494748 CATSPER4Q7RTX7 472 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 APOBEC3FQ8IUX4 373 aaKnown RBP15.26■□□□□ 0.03
SDF4-207ENST00000494748 DTWD1Q8N5C7 304 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 PJA1Q8NG27 643 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 PCED1BQ96HM7 432 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 PIF1Q9H611 641 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 RBM22Q9NW64 420 aaKnown RBP eCLIP15.26■□□□□ 0.03
SDF4-207ENST00000494748 CACNG4Q9UBN1 327 aa15.26■□□□□ 0.03
SDF4-207ENST00000494748 EVLQ9UI08 416 aaPredicted RBP15.26■□□□□ 0.03
SDF4-207ENST00000494748 MYBPHLA2RUH7 354 aa15.25■□□□□ 0.03
SDF4-207ENST00000494748 CNTN5O94779 1100 aa15.25■□□□□ 0.03
SDF4-207ENST00000494748 INMTO95050 263 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms