RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 PCDHGA1Q9Y5H4 931 aa23.21■■□□□ 1.31
CLIC3-203ENST00000494426 NUAK1O60285 661 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 MTX2O75431 263 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 ZNF8P17098 575 aaPredicted RBP23.2■■□□□ 1.3
CLIC3-203ENST00000494426 AK4P27144 223 aaPredicted RBP23.2■■□□□ 1.3
CLIC3-203ENST00000494426 BASP1P80723 227 aaKnown RBP23.2■■□□□ 1.3
CLIC3-203ENST00000494426 TMPRSS15P98073 1019 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 DAB2P98082 770 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 PDE1BQ01064 536 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 CTBSQ01459 385 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 FOXC1Q12948 553 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 PEX6Q13608 980 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 CERCAMQ5T4B2 595 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 MICALCLQ6ZW33 695 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 RAB44Q7Z6P3 723 aaPredicted RBP23.2■■□□□ 1.3
CLIC3-203ENST00000494426 SFTPA2Q8IWL1 248 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 OR2M4Q96R27 311 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 OR2AG1Q9H205 316 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 PRKAB1Q9Y478 270 aa23.2■■□□□ 1.3
CLIC3-203ENST00000494426 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.19■■□□□ 1.3
CLIC3-203ENST00000494426 TCRBV7S3A2A0A539 114 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 MROH6A6NGR9 719 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 CCL22O00626 93 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 PSMA3P25788 255 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 FNTAP49354 379 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 CCDC157Q569K6 752 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 OGFOD3Q6PK18 319 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 PPP1R21Q6ZMI0 780 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 GALNT13Q8IUC8 556 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 PHYKPLQ8IUZ5 450 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 CHCHD4Q8N4Q1 142 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 DNAAF3Q8N9W5 541 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 ZNF398Q8TD17 642 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 SCG3Q8WXD2 468 aaKnown RBP23.19■■□□□ 1.3
CLIC3-203ENST00000494426 DNAJC1Q96KC8 554 aaKnown RBP23.19■■□□□ 1.3
CLIC3-203ENST00000494426 RMI1Q9H9A7 625 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 SPATS2LQ9NUQ6 558 aaKnown RBP23.19■■□□□ 1.3
CLIC3-203ENST00000494426 NLE1Q9NVX2 485 aaPredicted RBP23.19■■□□□ 1.3
CLIC3-203ENST00000494426 ZNHIT2Q9UHR6 403 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 GPR34Q9UPC5 381 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 ZFC3H1O60293 1989 aaKnown RBP23.19■■□□□ 1.3
CLIC3-203ENST00000494426 PTPRBP23467 1997 aa23.19■■□□□ 1.3
CLIC3-203ENST00000494426 SPEGQ15772 3267 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 GOLGA6L10A0A0M3HER8 536 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 CHUKO15111 745 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 RFPL3O75679 317 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 SRP72O76094 671 aaKnown RBP23.18■■□□□ 1.3
CLIC3-203ENST00000494426 TRIM16O95361 564 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 PRAMEF1O95521 474 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 VPS41P49754 854 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 ILF3Q12906 894 aaKnown RBP eCLIP23.18■■□□□ 1.3
CLIC3-203ENST00000494426 GPS1Q13098 491 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 FAM46DQ8NEK8 389 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 GSDMCQ9BYG8 508 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 DDX47Q9H0S4 455 aaKnown RBP23.18■■□□□ 1.3
CLIC3-203ENST00000494426 SMOXQ9NWM0 555 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 SIRPGQ9P1W8 387 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 APPL1Q9UKG1 709 aa23.18■■□□□ 1.3
CLIC3-203ENST00000494426 ARHGEF17Q96PE2 2063 aaPredicted RBP23.18■■□□□ 1.3
CLIC3-203ENST00000494426 BPTFQ12830 3046 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 EME2A4GXA9 379 aaPredicted RBP23.17■■□□□ 1.3
CLIC3-203ENST00000494426 AGAP14A8MT82 685 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 GRID2O43424 1007 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 HYAL3O43820 417 aaPredicted RBP23.17■■□□□ 1.3
CLIC3-203ENST00000494426 NOBOXO60393 691 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 ETF1P62495 437 aaKnown RBP23.17■■□□□ 1.3
CLIC3-203ENST00000494426 FOXK2Q01167 660 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 TMEM115Q12893 351 aaPredicted RBP23.17■■□□□ 1.3
CLIC3-203ENST00000494426 ITGA9Q13797 1035 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 SEPT6Q14141 434 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 NR0B2Q15466 257 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 CCDC38Q502W7 563 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 DHRS13Q6UX07 377 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 ZNF534Q76KX8 674 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 KYQ8NBH2 561 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 GPR156Q8NFN8 814 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 STYXQ8WUJ0 223 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 CDKN2AIPNLQ96HQ2 116 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 RANBP9Q96S59 729 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 ASB8Q9H765 288 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 TAAR2Q9P1P5 351 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 GULP1Q9UBP9 304 aa23.17■■□□□ 1.3
CLIC3-203ENST00000494426 CCDC78A2IDD5 438 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 H7C0S8 307 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 VEGFDO43915 354 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 SPINK2P20155 84 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 TPSB2P20231 275 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 HADHAP40939 763 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 MAGEA6P43360 314 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 DUSP3P51452 185 aaPredicted RBP23.16■■□□□ 1.3
CLIC3-203ENST00000494426 TERF1P54274 439 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 ILKQ13418 452 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 KCNJ11Q14654 390 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 TPSAB1Q15661 275 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 GPRC6AQ5T6X5 926 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 GUSBP11Q6P575 273 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 SLC30A9Q6PML9 568 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 CHST15Q7LFX5 561 aaPredicted RBP23.16■■□□□ 1.3
CLIC3-203ENST00000494426 ZNF547Q8IVP9 402 aa23.16■■□□□ 1.3
CLIC3-203ENST00000494426 ARL10Q8N8L6 244 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms