RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 GAPDHSO14556 408 aaPredicted RBP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 NDC80O14777 642 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 VEGFDO43915 354 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 UGT1A9O60656 530 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 GPR89BP0CG08 455 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 UGT1A6P19224 532 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 UGT1A1P22309 533 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 UGT1A4P22310 534 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 KCNA4P22459 653 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 MGAT1P26572 445 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 MC4RP32245 332 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 UGT1A3P35503 534 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 UGT1A5P35504 534 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 ILF3Q12906 894 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 NFATC2Q13469 925 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 C1orf61Q13536 156 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 GTF2H3Q13889 308 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 TCEA2Q15560 299 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 RNASEH2BQ5TBB1 312 aaKnown RBP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 KCTD16Q68DU8 428 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 ZNF534Q76KX8 674 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 HOOK3Q86VS8 718 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 GALNT13Q8IUC8 556 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SLC25A45Q8N413 288 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 NAT8LQ8N9F0 302 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 OR4C6Q8NH72 309 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 PTCD2Q8WV60 388 aaKnown RBP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SCG3Q8WXD2 468 aaKnown RBP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 PEX13Q92968 403 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 CDKN2AIPNLQ96HQ2 116 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 CAMK1GQ96NX5 476 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 OR2M4Q96R27 311 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 CDC6Q99741 560 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 OR2AG1Q9H205 316 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 CAAP1Q9H8G2 361 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 RMI1Q9H9A7 625 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 UGT1A7Q9HAW7 530 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 UGT1A10Q9HAW8 530 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 UGT1A8Q9HAW9 530 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 ARFGAP3Q9NP61 516 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SMOXQ9NWM0 555 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SAMD15Q9P1V8 674 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 FTSJ1Q9UET6 329 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 ZNHIT2Q9UHR6 403 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 CRLS1Q9UJA2 301 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 PCOLCE2Q9UKZ9 415 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 GPSM3Q9Y4H4 160 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 OAS3Q9Y6K5 1087 aaKnown RBP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 EFCAB8A8MWE9 144 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 LMO7DNF2Z398 122 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 H7C0S8 307 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SMAPO00193 183 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 AKT1P31749 480 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 NOVA1P51513 510 aaKnown RBP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 CRADDP78560 199 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 XIAPP98170 497 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 DEFB133Q30KQ1 61 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 ARMC3Q5W041 872 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 CASC4Q6P4E1 433 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SNX20Q7Z614 316 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 TAF8Q7Z7C8 310 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 ADGRG6Q86SQ4 1221 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 MNS1Q8NEH6 495 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 DDHD1Q8NEL9 900 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SCARF2Q96GP6 870 aaPredicted RBP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SNF8Q96H20 258 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 GSDMCQ9BYG8 508 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 TRIM31Q9BZY9 425 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 CLPBQ9H078 707 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 TMEM168Q9H0V1 697 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 TRNAU1APQ9NX07 287 aaKnown RBP12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SYBUQ9NX95 663 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 ATXN10Q9UBB4 475 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 MRFAP1Q9Y605 127 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 SDR42E2A6NKP2 422 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 TPP1O14773 563 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 DNAJC6O75061 913 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 AVILO75366 819 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 MTX2O75431 263 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 CDK14O94921 469 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 LDOC1O95751 146 aaPredicted RBP12.34□□□□□ -0.43
TRA2A-209ENST00000494255 CEACAM1P13688 526 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 MSH3P20585 1137 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 PSMA3P25788 255 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 PRAMEP78395 509 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 CACNG1Q06432 222 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 PEX6Q13608 980 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 MORF4L2Q15014 288 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 GPR33Q49SQ1 333 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 PYCR3Q53H96 274 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 ZNF648Q5T619 568 aaPredicted RBP12.34□□□□□ -0.43
TRA2A-209ENST00000494255 GPRC6AQ5T6X5 926 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 PSAPL1Q6NUJ1 521 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 LVRNQ6Q4G3 990 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 AFTPHQ6ULP2 937 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 TAS2R42Q7RTR8 314 aa12.34□□□□□ -0.43
TRA2A-209ENST00000494255 CAND1Q86VP6 1230 aaKnown RBP12.34□□□□□ -0.43
TRA2A-209ENST00000494255 BBOF1Q8ND07 529 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms