RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 FASLGP48023 281 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 PIP4K2AP48426 406 aaPredicted RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 LMAN1P49257 510 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 HSD17B4P51659 736 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 CDH8P55286 799 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 TSPY1Q01534 308 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 TFCP2Q12800 502 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 AIMP1Q12904 312 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 HNRNPA0Q13151 305 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 MYBPHQ13203 477 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 MAD2L1Q13257 205 aaPredicted RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 OLIG2Q13516 323 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 PRPF4BQ13523 1007 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 NAE1Q13564 534 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 FRG1Q14331 258 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 IRF3Q14653 427 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 C15orf59Q2T9L4 293 aaPredicted RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 ALG11Q2TAA5 492 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 COL28A1Q2UY09 1125 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 MMEL1Q495T6 779 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 SGO1Q5FBB7 561 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 C9orf50Q5SZB4 431 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 FRG2Q64ET8 278 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 SIGIRRQ6IA17 410 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 JADE1Q6IE81 842 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 FBXO46Q6PJ61 603 aaPredicted RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 TAOK1Q7L7X3 1001 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 GALNTL5Q7Z4T8 443 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 SLFN11Q7Z7L1 901 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 DCP1BQ8IZD4 617 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 SCML4Q8N228 414 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 LMNTD1Q8N9Z9 388 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 KCTD6Q8NC69 237 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 WFIKKN2Q8TEU8 576 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 PRPF31Q8WWY3 499 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 PSPC1Q8WXF1 523 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 ATP6V1E2Q96A05 226 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 SLC22A18Q96BI1 424 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF653Q96CK0 615 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 VMP1Q96GC9 406 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 C1QTNF4Q9BXJ3 329 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 FTOQ9C0B1 505 aaKnown RBP eCLIP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 TKTL2Q9H0I9 626 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 KIF9Q9HAQ2 790 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 PCDH9Q9HC56 1237 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 FBRSL1Q9HCM7 1045 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 GPR108Q9NPR9 543 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 DDX4Q9NQI0 724 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 CNGB3Q9NQW8 809 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 MRPL15Q9P015 296 aaKnown RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 MALT1Q9UDY8 824 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 PROCRQ9UNN8 238 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 LOXL2Q9Y4K0 774 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 CCL27Q9Y4X3 112 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 STON1Q9Y6Q2 735 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 MAU2Q9Y6X3 613 aa2.38□□□□□ -2.03
LMNB1-207ENST00000494185 SOS1Q07889 1333 aaPredicted RBP2.38□□□□□ -2.03
LMNB1-207ENST00000494185 CKAP5Q14008 2032 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 IGLV5-52A0A0A0MRZ9 124 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 SMTNL1A8MU46 457 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 IFNL4K9M1U5 179 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 TBX10O75333 385 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 DAB1O75553 588 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CAVIN2O95810 425 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 ATP1A1P05023 1023 aaKnown RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CETPP11597 493 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 AMD1P17707 334 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 GABRB1P18505 474 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 MUTP22033 750 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 ANOS1P23352 680 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 OAS2P29728 719 aaKnown RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 TMPOP42166 694 aaKnown RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 PRCPP42785 496 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 HOXA1P49639 335 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 COMPP49747 757 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 METAP2P50579 478 aaKnown RBP eCLIP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF41P51814 821 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 MRPL12P52815 198 aaKnown RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 F2RL1P55085 397 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 MLLT10P55197 1068 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 CSNK2A1P68400 391 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 RBP5P82980 135 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 PLIN5Q00G26 463 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 ACSM2AQ08AH3 577 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 KIF5AQ12840 1032 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 BAATQ14032 418 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 PCLAFQ15004 111 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 OASLQ15646 514 aaKnown RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 ADIPOQQ15848 244 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 BMP2KLQ5H9B9 411 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 C1orf141Q5JVX7 400 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 ERMARDQ5T6L9 678 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 C9orf57Q5W0N0 161 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 PLEKHA7Q6IQ23 1121 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 C11orf88Q6PI97 169 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 IL27RAQ6UWB1 636 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 GDPD4Q6W3E5 623 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 B3GNT6Q6ZMB0 384 aa2.37□□□□□ -2.03
LMNB1-207ENST00000494185 ZNF704Q6ZNC4 412 aaPredicted RBP2.37□□□□□ -2.03
LMNB1-207ENST00000494185 QSOX2Q6ZRP7 698 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms