RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 NUP54Q7Z3B4 507 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 MPP5Q8N3R9 675 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 C16orf58Q96GQ5 468 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ISCA1Q9BUE6 129 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ASB7Q9H672 318 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 RNF121Q9H920 327 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ANKRA2Q9H9E1 313 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ABCD2Q9UBJ2 740 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 TUBG1P23258 451 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 EIF4BP23588 611 aaKnown RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 RPS12P25398 132 aaKnown RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SLC6A4P31645 630 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 MLLT6P55198 1093 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 PDK4Q16654 411 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ALG10BQ5I7T1 473 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 HSDL2Q6YN16 418 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 AHSA2Q719I0 299 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 RBFAQ8N0V3 343 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 BEND7Q8N7W2 519 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SLC43A3Q8NBI5 491 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 OR2T34Q8NGX1 318 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 OR2T3Q8NH03 318 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SMG7Q92540 1137 aaKnown RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 DNAJC18Q9H819 358 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 TBC1D17Q9HA65 648 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 MYOZ2Q9NPC6 264 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CALML5Q9NZT1 146 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 FARSAQ9Y285 508 aaKnown RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 GCC2Q8IWJ2 1684 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CLUHO75153 1309 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 A0A0J9YYE9 177 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 DHX15O43143 795 aaKnown RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 PRAMEF1O95521 474 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 NT5EP21589 574 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 KELP23276 732 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 S100PP25815 95 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CXCR3P49682 368 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 FOXO4P98177 505 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 MXD1Q05195 221 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 FAPQ12884 760 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CBLBQ13191 982 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SIM2Q14190 667 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 GRIK4Q16099 956 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ZDHHC20Q5W0Z9 365 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 HMBOX1Q6NT76 420 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SERPINA13PQ6UXR4 307 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SVOPLQ8N434 492 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 OR4C6Q8NH72 309 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CD300LFQ8TDQ1 290 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 C15orf40Q8WUR7 153 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 WNT8BQ93098 351 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CCDC120Q96HB5 630 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 NSMCE3Q96MG7 304 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 LPIN3Q9BQK8 851 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ARHGAP20Q9P2F6 1191 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 PCDHGB7Q9Y5F8 929 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 ARL5AQ9Y689 179 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 KIF21AQ7Z4S6 1674 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 GRIN2DO15399 1336 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 NFASCO94856 1347 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 M0R129 80 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CABYRO75952 493 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 HOXC6P09630 235 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CD44P16070 742 aaKnown RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 TSPAN8P19075 237 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CCR10P46092 362 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 BST1Q10588 318 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 MADCAM1Q13477 382 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 PUM1Q14671 1186 aaKnown RBP eCLIP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 GLYATQ6IB77 296 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 CES5AQ6NT32 575 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 FIP1L1Q6UN15 594 aaKnown RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SLC44A3Q8N4M1 653 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 HCAR2Q8TDS4 363 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 PFDN5Q99471 154 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 AGO4Q9HCK5 861 aaKnown RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 S100A14Q9HCY8 104 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SNTG1Q9NSN8 517 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 FAM105AQ9NUU6 356 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 SMPD3Q9NY59 655 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-221ENST00000493795 HCN3Q9P1Z3 774 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 OR12D3Q9UGF7 316 aa7.82□□□□□ -1.16
BRCA1-221ENST00000493795 PDPK1O15530 556 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 TBL1XO60907 577 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 PRKD3O94806 890 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 VNN2O95498 520 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 RENP00797 406 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 EPHA3P29320 983 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 IL12BP29460 328 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 GRK6P43250 576 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 GRK1Q15835 563 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 KLHL22Q53GT1 634 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 PPP1R15BQ5SWA1 713 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 PAMR1Q6UXH9 720 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 OR10H4Q8NGA5 316 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ZFP3Q96NJ6 502 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 NPAS2Q99743 824 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 ZYG11BQ9C0D3 744 aa7.81□□□□□ -1.16
BRCA1-221ENST00000493795 B3GNT4Q9C0J1 378 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms