RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 PMS2P1A4D2B8 440 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 NUDT21O43809 227 aaKnown RBP24.43■■□□□ 1.5
UPF3A-209ENST00000492270 SLC25A14O95258 325 aaPredicted RBP24.43■■□□□ 1.5
UPF3A-209ENST00000492270 EML2O95834 649 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 ZNF8P17098 575 aaPredicted RBP24.43■■□□□ 1.5
UPF3A-209ENST00000492270 GABREP78334 506 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 CCZ1BP86790 482 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 CCZ1P86791 482 aaPredicted RBP24.43■■□□□ 1.5
UPF3A-209ENST00000492270 C3orf38Q5JPI3 329 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 SPRED1Q7Z699 444 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 ARL14Q8N4G2 192 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 TTC13Q8NBP0 860 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 GLYATL1Q969I3 302 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 PLEKHG4BQ96PX9 1271 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 TRABDQ9H4I3 376 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 LZTFL1Q9NQ48 299 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 HACD3Q9P035 362 aa24.43■■□□□ 1.5
UPF3A-209ENST00000492270 ATXN7L1Q9ULK2 861 aaPredicted RBP24.43■■□□□ 1.5
UPF3A-209ENST00000492270 D6RAR5 112 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 NUAK1O60285 661 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 MTX2O75431 263 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 ACP5P13686 325 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 ADRA1AP35348 466 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 GDF10P55107 478 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 LRP8Q14114 963 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 ATP13A5Q4VNC0 1218 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 KHDC1Q4VXA5 237 aaKnown RBP24.42■■□□□ 1.5
UPF3A-209ENST00000492270 PDPK2PQ6A1A2 396 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 ADGRG6Q86SQ4 1221 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 FAM71DQ8N9W8 422 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 CARD9Q9H257 536 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 IL17CQ9P0M4 197 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 SATB2Q9UPW6 733 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 KCNK6Q9Y257 313 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 ITPR1Q14643 2758 aa24.42■■□□□ 1.5
UPF3A-209ENST00000492270 GPR39O43194 453 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 GRID2O43424 1007 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 PNLIPP16233 465 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 PTPRCAPQ14761 206 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 SEL1L2Q5TEA6 688 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 RANBP10Q6VN20 620 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 PHYKPLQ8IUZ5 450 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 SLC35B2Q8TB61 432 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 ATG4AQ8WYN0 398 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 FOXP3Q9BZS1 431 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 RMI1Q9H9A7 625 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 TRIM39Q9HCM9 518 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 IL26Q9NPH9 171 aa24.41■■□□□ 1.5
UPF3A-209ENST00000492270 AAR2Q9Y312 384 aaKnown RBP24.41■■□□□ 1.5
UPF3A-209ENST00000492270 TRBV23OR9-2A0A075B6M9 112 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 C5orf60A6NFR6 353 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 CCDC175P0C221 793 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 CA5AP35218 305 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 SPAM1P38567 509 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 OR1D5P58170 312 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 B4GALNT1Q00973 533 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 SPARCL1Q14515 664 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 PRPSAP1Q14558 356 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 PLA2G4EQ3MJ16 856 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 MEI1Q5TIA1 1274 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 CRTC3Q6UUV7 619 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 FAM151BQ6UXP7 276 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 ZNF438Q7Z4V0 828 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 DCBLD2Q96PD2 775 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 TMEM121Q9BTD3 319 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 POLR1BQ9H9Y6 1135 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 ARL5AQ9Y689 179 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 CHD6Q8TD26 2715 aa24.4■■□□□ 1.5
UPF3A-209ENST00000492270 RHPN2P1A8MT19 583 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 GAPDHSO14556 408 aaPredicted RBP24.39■■□□□ 1.49
UPF3A-209ENST00000492270 PPM1DO15297 605 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 B4GAT1O43505 415 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 LSSP48449 732 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 C19orf48Q6RUI8 117 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 ARHGEF18Q6ZSZ5 1173 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 TMPRSS9Q7Z410 1059 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 SLC37A2Q8TED4 501 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 VPS35Q96QK1 796 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 EPB41L5Q9HCM4 733 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 TBC1D29Q9UFV1 150 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 KCTD3Q9Y597 815 aa24.39■■□□□ 1.49
UPF3A-209ENST00000492270 NBEAQ8NFP9 2946 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 UGT1A9O60656 530 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 METTL18O95568 372 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 UGT1A6P19224 532 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 UGT1A1P22309 533 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 UGT1A4P22310 534 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 ALDH4A1P30038 563 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 UGT1A3P35503 534 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 UGT1A5P35504 534 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 PEX6Q13608 980 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 NR1D2Q14995 579 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 CHRNA6Q15825 494 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 TBC1D25Q3MII6 688 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 FOXR1Q6PIV2 292 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 KLHDC8BQ8IXV7 354 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 TAB3Q8N5C8 712 aaPredicted RBP24.38■■□□□ 1.49
UPF3A-209ENST00000492270 TBL1YQ9BQ87 522 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 UGT1A7Q9HAW7 530 aa24.38■■□□□ 1.49
UPF3A-209ENST00000492270 UGT1A10Q9HAW8 530 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms