RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 BEST3Q8N1M1 668 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 HM13Q8TCT9 377 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 TANKQ92844 425 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 TAAR8Q969N4 342 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 RSRC1Q96IZ7 334 aaKnown RBP3.87□□□□□ -1.79
VTA1-204ENST00000491881 FEM1CQ96JP0 617 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 MTERF1Q99551 399 aaKnown RBP3.87□□□□□ -1.79
VTA1-204ENST00000491881 SRSF8Q9BRL6 282 aaKnown RBP3.87□□□□□ -1.79
VTA1-204ENST00000491881 HRH4Q9H3N8 390 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 PCDH9Q9HC56 1237 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 TERF2IPQ9NYB0 399 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 SMARCAL1Q9NZC9 954 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 ZNF224Q9NZL3 707 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 C1RLQ9NZP8 487 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 SUCLA2Q9P2R7 463 aaPredicted RBP3.87□□□□□ -1.79
VTA1-204ENST00000491881 FBXL2Q9UKC9 423 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 PCDHGB4Q9UN71 923 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 KLHL20Q9Y2M5 609 aa3.87□□□□□ -1.79
VTA1-204ENST00000491881 CLEC18AA5D8T8 446 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 LRRC72A6NJI9 287 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 KRT86O43790 486 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 GJB3O75712 270 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 KCNK5O95279 499 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 STARD3NLO95772 234 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 DAOP14920 347 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 ACADLP28330 430 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 EIF2DP41214 584 aaKnown RBP3.86□□□□□ -1.79
VTA1-204ENST00000491881 PDLIM4P50479 330 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 ART1P52961 327 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 ZNF155Q12901 538 aaPredicted RBP3.86□□□□□ -1.79
VTA1-204ENST00000491881 SNTA1Q13424 505 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 KCNC3Q14003 757 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 KRT81Q14533 505 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 TOMM20Q15388 145 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 SF3B4Q15427 424 aaKnown RBP eCLIP3.86□□□□□ -1.79
VTA1-204ENST00000491881 SETMARQ53H47 684 aaPredicted RBP3.86□□□□□ -1.79
VTA1-204ENST00000491881 ZNF628Q5EBL2 1059 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 CFAP58Q5T655 872 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 NADSYN1Q6IA69 706 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 TSPAN33Q86UF1 283 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 ARID3BQ8IVW6 561 aaPredicted RBP3.86□□□□□ -1.79
VTA1-204ENST00000491881 CHERPQ8IWX8 916 aaKnown RBP3.86□□□□□ -1.79
VTA1-204ENST00000491881 SCYL3Q8IZE3 742 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 ZNF114Q8NC26 417 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 CLEC18CQ8NCF0 446 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 HMGCLL1Q8TB92 370 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 TRPC4APQ8TEL6 797 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 TMEM19Q96HH6 336 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 EGLN2Q96KS0 407 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 QRFPRQ96P65 431 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 ZNF385AQ96PM9 386 aaKnown RBP3.86□□□□□ -1.79
VTA1-204ENST00000491881 MEIS3Q99687 375 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 SPRY4Q9C004 299 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 TMEM39BQ9GZU3 492 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 C6orf106Q9H6K1 298 aaPredicted RBP3.86□□□□□ -1.79
VTA1-204ENST00000491881 MAGIXQ9H6Y5 334 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 TXLNGQ9NUQ3 528 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 MTMR10Q9NXD2 777 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 VDAC3Q9Y277 283 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 RABGAP1Q9Y3P9 1069 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 SNX8Q9Y5X2 465 aa3.86□□□□□ -1.79
VTA1-204ENST00000491881 SMAD9O15198 467 aaKnown RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 MID1O15344 667 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 KCNN4O15554 427 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 MITFO75030 526 aaPredicted RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 ZBTB11O95625 1053 aaPredicted RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 PMS2P2O95744 297 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 AFPP02771 609 aaKnown RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 LINC00271P0C7V0 271 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 TGFB3P10600 412 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 TNFRSF8P28908 595 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 GNL1P36915 607 aaPredicted RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 MRPS5P82675 430 aaKnown RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 DLG1Q12959 904 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 STK4Q13043 487 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 IZUMO4Q1ZYL8 232 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 ZNF585BQ52M93 769 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 RARS2Q5T160 578 aaKnown RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 PAPD4Q6PIY7 484 aaKnown RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 BRAT1Q6PJG6 821 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 C18orf65Q6ZTR6 163 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 RNF113BQ8IZP6 322 aaKnown RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 POC5Q8NA72 575 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 KCNH5Q8NCM2 988 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 LILRB1Q8NHL6 650 aaPredicted RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 GSDMBQ8TAX9 411 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 DUSP19Q8WTR2 217 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 NUDCD2Q8WVJ2 157 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 RHBDF1Q96CC6 855 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 SMC6Q96SB8 1091 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 SEMA3CQ99985 751 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 MXD3Q9BW11 206 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 TEX12Q9BXU0 123 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 IL25Q9H293 177 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 DNAJC18Q9H819 358 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 CD93Q9NPY3 652 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 DBNLQ9UJU6 430 aaKnown RBP3.85□□□□□ -1.79
VTA1-204ENST00000491881 RPS6KA6Q9UK32 745 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 PADI1Q9ULC6 663 aa3.85□□□□□ -1.79
VTA1-204ENST00000491881 KCNS2Q9ULS6 477 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms