RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 C1orf232A0A0U1RR37 186 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 ESPNB1AK53 854 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 ZNF185O15231 689 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 INPP4BO15327 924 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 NUDT21O43809 227 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 URI1O94763 535 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 ECEL1O95672 775 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 EML2O95834 649 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 PIRTP0C851 137 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 PNLIPP16233 465 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 SPINT3P49223 89 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 PCBP4P57723 403 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 ZFP36L1Q07352 338 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 WASHC5Q12768 1159 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 PYCR3Q53H96 274 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 HENMT1Q5T8I9 393 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 DARS2Q6PI48 645 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 SLC30A9Q6PML9 568 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 LYSMD3Q7Z3D4 306 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 KDELC2Q7Z4H8 507 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 CDKL3Q8IVW4 592 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 NAGSQ8N159 534 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 NDUFAF2Q8N183 169 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 RASGEF1CQ8N431 466 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 ARL14Q8N4G2 192 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 OR6C4Q8NGE1 309 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 WDR36Q8NI36 951 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 KIF18AQ8NI77 898 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 ZDHHC1Q8WTX9 485 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 LIN37Q96GY3 246 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 FAM118BQ9BPY3 351 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 FRMD8P1Q9BZ68 369 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 HOMER3Q9NSC5 361 aa12.6□□□□□ -0.39
SEC61A1-206ENST00000491668 HELZ2Q9BYK8 2649 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 CCDC187A0A096LP49 1063 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 TCRBV7S2A1N4TA0A589 114 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 HACD1B0YJ81 288 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 RRP8O43159 456 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 DNAJC6O75061 913 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 STK10O94804 968 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 TNFSF15O95150 251 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 MT-CYBP00156 380 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 RBP3P10745 1247 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 HGFP14210 728 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 PTPN3P26045 913 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 CCKBRP32239 447 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 CD68P34810 354 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 ILF3Q12906 894 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 KLF1Q13351 362 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 XRCC4Q13426 336 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 NR1D2Q14995 579 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 NOMO1Q15155 1222 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 FOXR1Q6PIV2 292 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 LRRC69Q6ZNQ3 347 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 MARK2Q7KZI7 788 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 CLEC14AQ86T13 490 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 SLITRK4Q8IW52 837 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 RAVER1Q8IY67 606 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 ZNF248Q8NDW4 579 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 ACTRT1Q8TDG2 376 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 TEKT5Q96M29 485 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 OR2M4Q96R27 311 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 MLPHQ9BV36 600 aaPredicted RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 GSDMCQ9BYG8 508 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 SLC25A51Q9H1U9 297 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 GLOD4Q9HC38 313 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 RNF14Q9UBS8 474 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 PRKAB1Q9Y478 270 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 SPO11Q9Y5K1 396 aa12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 ZFC3H1O60293 1989 aaKnown RBP12.59□□□□□ -0.39
SEC61A1-206ENST00000491668 AURKAO14965 403 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 PPM1DO15297 605 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 MTSS1O43312 755 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF189O75820 626 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 CA4P22748 312 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 UGT1A5P35504 534 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 INHBCP55103 352 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 OR1D5P58170 312 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 CFHR1Q03591 330 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 SNX1Q13596 522 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 TEX44Q53QW1 395 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 PCSK4Q6UW60 755 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 ZNF574Q6ZN55 896 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 RAB11FIP2Q7L804 512 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 TMC3Q7Z5M5 1100 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 GPR26Q8NDV2 337 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 C1orf54Q8WWF1 131 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 ATG4AQ8WYN0 398 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 QKIQ96PU8 341 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 AP1M1Q9BXS5 423 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 ADGRE3Q9BY15 652 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 SEMA6CQ9H3T2 930 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 FAM83DQ9H4H8 585 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 RDH14Q9HBH5 336 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 EPB41L5Q9HCM4 733 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 THSD1Q9NS62 852 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 SMARCAL1Q9NZC9 954 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 DNPEPQ9ULA0 475 aa12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 TTC7AQ9ULT0 858 aaPredicted RBP12.58□□□□□ -0.4
SEC61A1-206ENST00000491668 SHOC2Q9UQ13 582 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms