RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 RNF215Q9Y6U7 377 aa7.29□□□□□ -1.24
PRPF4B-208ENST00000490653 COL12A1Q99715 3063 aa7.29□□□□□ -1.24
PRPF4B-208ENST00000490653 A0A0J9YYE9 177 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 PRSS38A1L453 326 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 LRRD1A4D1F6 860 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 B4DGG1 531 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 AKR1B15C9JRZ8 316 aaPredicted RBP7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 F5H423 210 aaPredicted RBP7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 INPP4BO15327 924 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 CBFA2T2O43439 604 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 EML2O95834 649 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 TRBC1P01850 177 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 RPLP0P05388 317 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 PIRTP0C851 137 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 CYP2A6P11509 494 aaPredicted RBP7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 COMTP21964 271 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 CA5AP35218 305 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 SERPINB6P35237 376 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 HSPA9P38646 679 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 ETV5P41161 510 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 CD86P42081 329 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 MAGEA1P43355 309 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 GPR1P46091 355 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 LSSP48449 732 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 MARCKSL1P49006 195 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 BLKP51451 505 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 STC1P52823 247 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 OR1D5P58170 312 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 DYNLT1P63172 113 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 CDK3Q00526 305 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 B4GALNT1Q00973 533 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 SRSF6Q13247 344 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 ARHGEF7Q14155 803 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 RAET1GQ6H3X3 334 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 LVRNQ6Q4G3 990 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 USP53Q70EK8 1073 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 GAS2L3Q86XJ1 694 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 RFX6Q8HWS3 928 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 SPACA3Q8IXA5 215 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 BBS5Q8N3I7 341 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 ARL10Q8N8L6 244 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 TC2NQ8N9U0 490 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 LPCAT1Q8NF37 534 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 SPATA22Q8NHS9 363 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 TPCN2Q8NHX9 752 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 GPBAR1Q8TDU6 330 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 HIC2Q96JB3 615 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 CCDC42Q96M95 316 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 SLC46A1Q96NT5 459 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 HERPUD2Q9BSE4 406 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 RIOK2Q9BVS4 552 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 TDRD1Q9BXT4 1180 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 POLR1EQ9GZS1 481 aaKnown RBP7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 RBSNQ9H1K0 784 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 LRRN3Q9H3W5 708 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 DPEP2Q9H4A9 486 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 WDR26Q9H7D7 661 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 POLR1BQ9H9Y6 1135 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 USP29Q9HBJ7 922 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 PCDH9Q9HC56 1237 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 LRIT1Q9P2V4 623 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 ALG6Q9Y672 507 aa7.28□□□□□ -1.24
PRPF4B-208ENST00000490653 A0A0U1RQJ8 604 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 A0A1W2PQ67 120 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 FADS2P1A8MWK0 482 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 APOL1O14791 398 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 TNFRSF10CO14798 259 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 PPM1DO15297 605 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 MTA2O94776 668 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 TNFSF15O95150 251 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 ECEL1O95672 775 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 MT-CYBP00156 380 aaPredicted RBP7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 KRT1P04264 644 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 ATP1A1P05023 1023 aaKnown RBP7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 KRT7P08729 469 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 MYCLP1P12525 358 aaPredicted RBP7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 PECAM1P16284 738 aaPredicted RBP7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 PTMSP20962 102 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 MPSTP25325 297 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 MAN1A1P33908 653 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 CD68P34810 354 aaPredicted RBP7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 ACTN2P35609 894 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 ADCY8P40145 1251 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 EPHB1P54762 984 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 CFHR1Q03591 330 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 PPIDQ08752 370 aaKnown RBP7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 AP1B1Q10567 949 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 GALNT3Q14435 633 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 HLTFQ14527 1009 aaKnown RBP eCLIP7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 NOMO1Q15155 1222 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 C14orf28Q4W4Y0 310 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 RALGPS1Q5JS13 557 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 NKAIN2Q5VXU1 208 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 KAZNQ674X7 775 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 SLC9A4Q6AI14 798 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 ALG1LQ6GMV1 187 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 SLC30A9Q6PML9 568 aa7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 ZNF574Q6ZN55 896 aaPredicted RBP7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 RBM44Q6ZP01 1051 aaKnown RBP7.27□□□□□ -1.25
PRPF4B-208ENST00000490653 MICALCLQ6ZW33 695 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms