RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 EXD1Q8NHP7 514 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 KIAA1524Q8TCG1 905 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 MRFAP1L1Q96HT8 127 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 CCDC74BQ96LY2 380 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 MLPHQ9BV36 600 aaPredicted RBP11.7□□□□□ -0.54
SRSF4-204ENST00000489898 DPH1Q9BZG8 443 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 SPRY4Q9C004 299 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 SYNDIG1Q9H7V2 258 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 C10orf88Q9H8K7 445 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 SIDT1Q9NXL6 827 aaKnown RBP11.7□□□□□ -0.54
SRSF4-204ENST00000489898 DNPEPQ9ULA0 475 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 DOLKQ9UPQ8 538 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 SHOC2Q9UQ13 582 aa11.7□□□□□ -0.54
SRSF4-204ENST00000489898 PCM1Q15154 2024 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 MN1Q10571 1320 aaPredicted RBP11.69□□□□□ -0.54
SRSF4-204ENST00000489898 TEX51A0A1B0GUA7 166 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 GRID2IPA4D2P6 1211 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 RGSL1A5PLK6 1076 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 GOLGA6CA6NDK9 693 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 GOLGA6BA6NDN3 693 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 PPP1R12AO14974 1030 aaPredicted RBP11.69□□□□□ -0.54
SRSF4-204ENST00000489898 RRP8O43159 456 aaKnown RBP11.69□□□□□ -0.54
SRSF4-204ENST00000489898 PJA2O43164 708 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 KLK10O43240 276 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 SGTAO43765 313 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 NDST3O95803 873 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 GOLGA6DP0CG33 693 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 FGF3P11487 239 aaPredicted RBP11.69□□□□□ -0.54
SRSF4-204ENST00000489898 PTPN7P35236 360 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 ADRA1AP35348 466 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 CLCNKAP51800 687 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 LIMK2P53671 638 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 CDK18Q07002 472 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 LRP8Q14114 963 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 TFDP3Q5H9I0 405 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 SIRPB2Q5JXA9 342 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 NKAIN2Q5VXU1 208 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 NT5DC3Q86UY8 548 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 ACRBPQ8NEB7 543 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 HTR3CQ8WXA8 447 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 SCG3Q8WXD2 468 aaKnown RBP11.69□□□□□ -0.54
SRSF4-204ENST00000489898 HAUS1Q96CS2 278 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 FAM83DQ9H4H8 585 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 MAGEE1Q9HCI5 957 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 DDX56Q9NY93 547 aaKnown RBP11.69□□□□□ -0.54
SRSF4-204ENST00000489898 GOLGA6AQ9NYA3 693 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 UBP1Q9NZI7 540 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 MOSPD1Q9UJG1 213 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 KCNK6Q9Y257 313 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 PCDHA13Q9Y5I0 950 aa11.69□□□□□ -0.54
SRSF4-204ENST00000489898 BTNL10A8MVZ5 291 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 F5H423 210 aaPredicted RBP11.68□□□□□ -0.54
SRSF4-204ENST00000489898 NVLO15381 856 aaKnown RBP11.68□□□□□ -0.54
SRSF4-204ENST00000489898 MTX2O75431 263 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 NDUFA10O95299 355 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 PYGLP06737 847 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 ACP5P13686 325 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 MAGEA1P43355 309 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 GPR3P46089 330 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 NR2C2P49116 596 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 EPHB1P54762 984 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 WNT3AP56704 352 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 TMPRSS3P57727 454 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 PCSK7Q16549 785 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 ALS2CLQ60I27 953 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 LRRC69Q6ZNQ3 347 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 GPR155Q7Z3F1 870 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 GALNT13Q8IUC8 556 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 ZNF843Q8N446 348 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 FBXO39Q8N4B4 442 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 TRAM1L1Q8N609 369 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 GLYATL1Q969I3 302 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 ZNF830Q96NB3 372 aaPredicted RBP11.68□□□□□ -0.54
SRSF4-204ENST00000489898 TMEM74Q96NL1 305 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 PLEKHG4BQ96PX9 1271 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 VPS35Q96QK1 796 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 PANX2Q96RD6 677 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 FCRL5Q96RD9 977 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 ANP32EQ9BTT0 268 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 CARD9Q9H257 536 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 ZFYVE1Q9HBF4 777 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 ZNHIT6Q9NWK9 470 aaKnown RBP11.68□□□□□ -0.54
SRSF4-204ENST00000489898 IL17CQ9P0M4 197 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 ZNF624Q9P2J8 865 aaPredicted RBP11.68□□□□□ -0.54
SRSF4-204ENST00000489898 TRIM10Q9UDY6 481 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 PISDQ9UG56 409 aa11.68□□□□□ -0.54
SRSF4-204ENST00000489898 PTPN13Q12923 2485 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 UTP20O75691 2785 aaKnown RBP11.67□□□□□ -0.54
SRSF4-204ENST00000489898 APOC4-APOC2K7ER74 178 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 ERVH48-1M5A8F1 160 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 AGRPO00253 132 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 SPOPO43791 374 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 PMPCBO75439 489 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 APOC2P02655 101 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 LIPCP11150 499 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 SPTBP11277 2137 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 F3P13726 295 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 ZFXP17010 805 aaPredicted RBP11.67□□□□□ -0.54
SRSF4-204ENST00000489898 CA4P22748 312 aa11.67□□□□□ -0.54
SRSF4-204ENST00000489898 NFKBIAP25963 317 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms