RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 RBM23Q86U06 439 aaKnown RBP5.56□□□□□ -1.52
VPS26A-206ENST00000489794 SFR1Q86XK3 245 aa5.56□□□□□ -1.52
VPS26A-206ENST00000489794 NRROSQ86YC3 692 aa5.56□□□□□ -1.52
VPS26A-206ENST00000489794 TAGAPQ8N103 731 aa5.56□□□□□ -1.52
VPS26A-206ENST00000489794 RBMXL3Q8N7X1 1067 aaKnown RBP5.56□□□□□ -1.52
VPS26A-206ENST00000489794 SAT2Q96F10 170 aaPredicted RBP5.56□□□□□ -1.52
VPS26A-206ENST00000489794 CDCA5Q96FF9 252 aa5.56□□□□□ -1.52
VPS26A-206ENST00000489794 TMEM19Q96HH6 336 aa5.56□□□□□ -1.52
VPS26A-206ENST00000489794 EGLN2Q96KS0 407 aa5.56□□□□□ -1.52
VPS26A-206ENST00000489794 CMKLR1Q99788 373 aa5.56□□□□□ -1.52
VPS26A-206ENST00000489794 DDX31Q9H8H2 851 aaKnown RBP5.56□□□□□ -1.52
VPS26A-206ENST00000489794 UBTD1Q9HAC8 227 aa5.56□□□□□ -1.52
VPS26A-206ENST00000489794 SEBOXQ9HB31 216 aaPredicted RBP5.56□□□□□ -1.52
VPS26A-206ENST00000489794 SUCLA2Q9P2R7 463 aaPredicted RBP5.56□□□□□ -1.52
VPS26A-206ENST00000489794 SWAP70Q9UH65 585 aa5.56□□□□□ -1.52
VPS26A-206ENST00000489794 TMEM184BQ9Y519 407 aaPredicted RBP5.56□□□□□ -1.52
VPS26A-206ENST00000489794 PTPRCP08575 1304 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 C4orf47A7E2U8 309 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 B4DLN1 442 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 TPPPO94811 219 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 ZBTB11O95625 1053 aaPredicted RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 ICAM1P05362 532 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 GNL1P36915 607 aaPredicted RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 APOBEC1P41238 236 aaKnown RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 MRPL12P52815 198 aaKnown RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 MRPS5P82675 430 aaKnown RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 POU3F1Q03052 451 aaPredicted RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 GRSF1Q12849 480 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 C9orf57Q5W0N0 161 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 KIAA0930Q6ICG6 404 aaPredicted RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 HJURPQ8NCD3 748 aaPredicted RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 OR2AK2Q8NG84 335 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 HM13Q8TCT9 377 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 FIG4Q92562 907 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 FEM1CQ96JP0 617 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 FAM84BQ96KN1 310 aaPredicted RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 DACH2Q96NX9 599 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 TEX12Q9BXU0 123 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 PIGMQ9H3S5 423 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 EBF2Q9HAK2 575 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 TMEM30AQ9NV96 361 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 DBNLQ9UJU6 430 aaKnown RBP5.55□□□□□ -1.52
VPS26A-206ENST00000489794 PCDHGB1Q9Y5G3 927 aa5.55□□□□□ -1.52
VPS26A-206ENST00000489794 PLSCR5A0PG75 271 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 LRRC72A6NJI9 287 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 FAM90A26D6RGX4 464 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 GFPT2O94808 682 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 PPP1R3DO95685 299 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 IL15P40933 162 aaPredicted RBP5.54□□□□□ -1.52
VPS26A-206ENST00000489794 MSH2P43246 934 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 IZUMO4Q1ZYL8 232 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 ZNF585BQ52M93 769 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 C18orf63Q68DL7 685 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 ZNF280DQ6N043 979 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 SPSB3Q6PJ21 355 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 CLEC4GQ6UXB4 293 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 UNQ6126/PRO20091Q6UXV3 157 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 ZNF704Q6ZNC4 412 aaPredicted RBP5.54□□□□□ -1.52
VPS26A-206ENST00000489794 TPRG1Q6ZUI0 275 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 CCDC190Q86UF4 302 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 PIGTQ969N2 578 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 JAKMIP2Q96AA8 810 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 CALML4Q96GE6 196 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 NUDT16L1Q9BRJ7 211 aaKnown RBP5.54□□□□□ -1.52
VPS26A-206ENST00000489794 C1QTNF4Q9BXJ3 329 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 FKRPQ9H9S5 495 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 TRMT1Q9NXH9 659 aaKnown RBP5.54□□□□□ -1.52
VPS26A-206ENST00000489794 MALT1Q9UDY8 824 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 PADI1Q9ULC6 663 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 KLHL20Q9Y2M5 609 aa5.54□□□□□ -1.52
VPS26A-206ENST00000489794 ARHGEF40Q8TER5 1519 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 IGHV4OR15-8A0A075B7B6 117 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 SAA2-SAA4A0A096LPE2 208 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 A0A0G2JPF8 293 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 hCG_1807616A0A1W2PRN6 198 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 HNRNPCL2B2RXH8 293 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 HNRNPCL3B7ZW38 293 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 H3BQ06 376 aaPredicted RBP5.53□□□□□ -1.52
VPS26A-206ENST00000489794 ANKRD28O15084 1053 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 BUD23O43709 281 aaKnown RBP5.53□□□□□ -1.52
VPS26A-206ENST00000489794 MITFO75030 526 aaPredicted RBP5.53□□□□□ -1.52
VPS26A-206ENST00000489794 DDNO94850 711 aaPredicted RBP5.53□□□□□ -1.52
VPS26A-206ENST00000489794 HNRNPCL4P0DMR1 293 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 SAT1P21673 171 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 PDLIM4P50479 330 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 MFAP4P55083 255 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 CDC16Q13042 620 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 NSUN5P2Q63ZY6 315 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 TMED8Q6PL24 325 aaPredicted RBP5.53□□□□□ -1.52
VPS26A-206ENST00000489794 ARMC9Q7Z3E5 817 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 EXOC3L1Q86VI1 746 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 ZNF34Q8IZ26 560 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 C1orf87Q8N0U7 546 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 C17orf53Q8N3J3 647 aaPredicted RBP5.53□□□□□ -1.52
VPS26A-206ENST00000489794 EMC1Q8N766 993 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 SLC38A9Q8NBW4 561 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 SPATA22Q8NHS9 363 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 PPP4R1Q8TF05 950 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 RHBDF1Q96CC6 855 aa5.53□□□□□ -1.52
VPS26A-206ENST00000489794 RSRC1Q96IZ7 334 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms