RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 MMP20O60882 483 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 MT-CO1P00395 513 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 ATP1A3P13637 1013 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 IDEP14735 1019 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 AK4P27144 223 aaPredicted RBP7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 ADORA2BP29275 332 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 KIAA1024LP59773 190 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 ILF3Q12906 894 aaKnown RBP eCLIP7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 CUL4BQ13620 913 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 CNNM4Q6P4Q7 775 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 CYB5D1Q6P9G0 228 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 SLC30A9Q6PML9 568 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 FAM198BQ6UWH4 519 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 DPY19L3Q6ZPD9 716 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 PLXDC1Q8IUK5 500 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 EID3Q8N140 333 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 MARVELD2Q8N4S9 558 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 IGSF22Q8N9C0 903 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 NOC3LQ8WTT2 800 aaKnown RBP7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 POMGNT1Q8WZA1 660 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 HDAC10Q969S8 669 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 FUBP1Q96AE4 644 aaKnown RBP7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 SPSB2Q99619 263 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 TTYH3Q9C0H2 523 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 BLZF1Q9H2G9 400 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 L2HGDHQ9H9P8 463 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 ATP13A2Q9NQ11 1180 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 FAM49BQ9NUQ9 324 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 KBTBD4Q9NVX7 518 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 RWDD2AQ9UIY3 292 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 PYCARDQ9ULZ3 195 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 DNM3Q9UQ16 869 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 CTNND2Q9UQB3 1225 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 RNF6Q9Y252 685 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 CCDC88CQ9P219 2028 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 PRSS38A1L453 326 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 A8MV72 311 aaPredicted RBP7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 PRPF6O94906 941 aaKnown RBP7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 FGFR1OPO95684 399 aaKnown RBP7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 TP53P04637 393 aaPredicted RBP7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 GARTP22102 1010 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 KIR2DL3P43628 341 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 EPHA4P54764 986 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 GTF2BQ00403 316 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 AIMP2Q13155 320 aaKnown RBP7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 CXorf57Q6NSI4 855 aaKnown RBP7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 BHLHA9Q7RTU4 235 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 VSTM4Q8IW00 320 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 UNC45BQ8IWX7 931 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 C12orf29Q8N999 325 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 SLC38A9Q8NBW4 561 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 SLC37A2Q8TED4 501 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 SNX29Q8TEQ0 813 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 NELFBQ8WX92 580 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 ARHGEF26Q96DR7 871 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 DHTKD1Q96HY7 919 aaPredicted RBP7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 PLIN2Q99541 437 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 C7orf25Q9BPX7 421 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 TKTL2Q9H0I9 626 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 XYLT2Q9H1B5 865 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 SMYD3Q9H7B4 428 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 P4HTMQ9NXG6 502 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 RARRES3Q9UL19 164 aa7.37□□□□□ -1.23
EXOSC3-206ENST00000489414 TRAV17A0A0B4J275 112 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 PVALEFA0A1B0GWK0 134 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 C16orf96A6NNT2 1141 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 K7ERQ8 282 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 PEX12O00623 359 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 RHOBTB3O94955 611 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 RASAL1O95294 804 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 CST3P01034 146 aaPredicted RBP7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 TNNC2P02585 160 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 TUBB4AP04350 444 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 PRKCSHP14314 528 aaPredicted RBP7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 CASP1P29466 404 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 STX17P56962 302 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 LRMPQ12912 555 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 MTM1Q13496 603 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 TUBB3Q13509 450 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 SNTB1Q13884 538 aaKnown RBP7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 TRIM14Q14142 442 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 CAPRIN1Q14444 709 aaKnown RBP7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 DAZAP2Q15038 168 aaPredicted RBP7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 KIAA0930Q6ICG6 404 aaPredicted RBP7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 CEP128Q6ZU80 1094 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 KCNK18Q7Z418 384 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 DSELQ8IZU8 1212 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 CRYBG2Q8N1P7 616 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 SAAL1Q96ER3 474 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 GPR137Q96N19 417 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 LRFN5Q96NI6 719 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 FIZ1Q96SL8 496 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 EPB41L1Q9H4G0 881 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 TRNAU1APQ9NX07 287 aaKnown RBP7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 FCF1Q9Y324 198 aaKnown RBP7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 SACSQ9NZJ4 4579 aa7.36□□□□□ -1.23
EXOSC3-206ENST00000489414 FREM1Q5H8C1 2179 aa7.35□□□□□ -1.23
EXOSC3-206ENST00000489414 A0A1B0GTH6 734 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms