RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ATXN3LQ9H3M9 355 aa8.43□□□□□ -1.06
VTI1A-207ENST00000489357 SFXN1Q9H9B4 322 aa8.43□□□□□ -1.06
VTI1A-207ENST00000489357 CYP4F11Q9HBI6 524 aa8.43□□□□□ -1.06
VTI1A-207ENST00000489357 TMEM45AQ9NWC5 275 aa8.43□□□□□ -1.06
VTI1A-207ENST00000489357 TAS2R13Q9NYV9 303 aa8.43□□□□□ -1.06
VTI1A-207ENST00000489357 MCM8Q9UJA3 840 aa8.43□□□□□ -1.06
VTI1A-207ENST00000489357 AGO1Q9UL18 857 aaKnown RBP8.43□□□□□ -1.06
VTI1A-207ENST00000489357 A0A0D9SEW6 157 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 A8MT66 165 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 A8MUI8 341 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ANKRD66B4E2M5 251 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 PRRG1O14668 218 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 LIN7AO14910 233 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 MUSKO15146 869 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 GRID2O43424 1007 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 DCXO43602 365 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 SOCS5O75159 536 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 VPS4BO75351 444 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ENTPD5O75356 428 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 RFPL2O75678 378 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 PSMG1O95456 288 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 GOT2P00505 430 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 KLKB1P03952 638 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 FGF4P08620 206 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CCDC166P0CW27 439 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 COX4I1P13073 169 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ACADSP16219 412 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ZNF37AP17032 561 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 GM2AP17900 193 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 NCF2P19878 526 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 SAT1P21673 171 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 PMLP29590 882 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CA8P35219 290 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 VHLP40337 213 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ACADVLP49748 655 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 EPHA5P54756 1037 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 HERVK_113P63132 956 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 XIAPP98170 497 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 UBAP2LQ14157 1087 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CSHL1Q14406 222 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CCDC6Q16204 474 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CRY1Q16526 586 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CXorf57Q6NSI4 855 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 RETSATQ6NUM9 610 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 UGT3A1Q6NUS8 523 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 PGM2L1Q6PCE3 622 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 TXNDC11Q6PKC3 985 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CCDC149Q6ZUS6 474 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CHSY3Q70JA7 882 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 EFL1Q7Z2Z2 1120 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 GLT6D1Q7Z4J2 308 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 PTAR1Q7Z6K3 402 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 DNAJB7Q7Z6W7 309 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ISCA2Q86U28 154 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 TMEM126BQ8IUX1 230 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 LSMEM2Q8N112 164 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 NKAPQ8N5F7 415 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 MAB21L3Q8N8X9 362 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 TXNDC5Q8NBS9 432 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 PPFIBP2Q8ND30 876 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 STAG3L4Q8TBR4 150 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 BLOC1S5Q8TDH9 187 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 PRR11Q96HE9 360 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CDKN2AIPNLQ96HQ2 116 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 NECTIN4Q96NY8 510 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 TTC1Q99614 292 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 OLFM1Q99784 485 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 AARSD1Q9BTE6 412 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 C2orf49Q9BVC5 232 aaPredicted RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 C1QTNF3Q9BXJ4 246 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ERVK-6Q9BXR3 956 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 DERL2Q9GZP9 239 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 VCX3BQ9H321 246 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 POMKQ9H5K3 350 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 MEAF6Q9HAF1 191 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 MAGEE1Q9HCI5 957 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ZBTB26Q9HCK0 441 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 CD320Q9NPF0 282 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 TIMMDC1Q9NPL8 285 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 UTP6Q9NYH9 597 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 DNMT3BQ9UBC3 853 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 ZMYM5Q9UJ78 669 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 LSM7Q9UK45 103 aaKnown RBP8.42□□□□□ -1.06
VTI1A-207ENST00000489357 INSL5Q9Y5Q6 135 aa8.42□□□□□ -1.06
VTI1A-207ENST00000489357 A0A088AWK7 358 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 A0A1W2PQ67 120 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 CCDC162PA2VCL2 907 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 SLC35F4A4IF30 521 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 LOC730098B7Z3J9 87 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 H3BMM5 538 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 STX16-NPEPL1H3BU86 382 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 STX16O14662 325 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 KERAO60938 352 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 VPS26AO75436 327 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 ZMPSTE24O75844 475 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 ESR1P03372 595 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 F11P03951 625 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 C8AP07357 584 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms