RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 GPR63Q9BZJ6 419 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 CEP44Q9C0F1 390 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 MTIF3Q9H2K0 278 aaKnown RBP6.59□□□□□ -1.35
HDLBP-243ENST00000488923 ALG9Q9H6U8 611 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 EFCAB1Q9HAE3 211 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 MEAF6Q9HAF1 191 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 ZNF334Q9HCZ1 680 aaPredicted RBP6.59□□□□□ -1.35
HDLBP-243ENST00000488923 BATF3Q9NR55 127 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 ABCB8Q9NUT2 735 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 SMPD4Q9NXE4 827 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 UTP6Q9NYH9 597 aaKnown RBP6.59□□□□□ -1.35
HDLBP-243ENST00000488923 IL17CQ9P0M4 197 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 KLHL42Q9P2K6 505 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 TBC1D14Q9P2M4 693 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 PRKAG2Q9UGJ0 569 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 VPS51Q9UID3 782 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 ZDHHC2Q9UIJ5 367 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 SLC25A13Q9UJS0 675 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 PLA2G4CQ9UP65 541 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 SLC8A2Q9UPR5 921 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 ZNF711Q9Y462 761 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 TRAF6Q9Y4K3 522 aa6.59□□□□□ -1.35
HDLBP-243ENST00000488923 TNPO3Q9Y5L0 923 aaKnown RBP6.59□□□□□ -1.35
HDLBP-243ENST00000488923 COL4A6Q14031 1691 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 MYO18AQ92614 2054 aaKnown RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 BBIP1A8MTZ0 92 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 A8MUI8 341 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 C1QTNF9BB2RNN3 333 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 E9PBE3 544 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 EIF3FO00303 357 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ZNF197O14709 1029 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 PRMT5O14744 637 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 SLC9A3R1O14745 358 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 AURKAO14965 403 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 GRM6O15303 877 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 HTRA2O43464 458 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 GREM1O60565 184 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 KLHL41O60662 606 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 SNX2O60749 519 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 XYLBO75191 536 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 SUPT7LO94864 414 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 SLC4A1P02730 911 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 S100BP04271 92 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 HNRNPA1P09651 372 aaKnown RBP eCLIP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 GFAPP14136 432 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 TCF3P15923 654 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 GNAZP19086 355 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 RPS3P23396 243 aaKnown RBP eCLIP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ARRB2P32121 409 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 GPC1P35052 558 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 CA8P35219 290 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 CPOXP36551 454 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 RGRP47804 291 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 CPA2P48052 419 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 SGSHP51688 502 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 EPHA5P54756 1037 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 POLR2LP62875 67 aaKnown RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 BTKQ06187 659 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 TRAF2Q12933 501 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 GRIK2Q13002 908 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 LCP2Q13094 533 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 CUL3Q13618 768 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 GRIN2CQ14957 1233 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 KPNB1Q14974 876 aaKnown RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 RCN1Q15293 331 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 PDCD2Q16342 344 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 LRRC26Q2I0M4 334 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 TTLL9Q3SXZ7 439 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 SPATS1Q496A3 300 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ZRANB3Q5FWF4 1079 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ZNF789Q5FWF6 425 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ANKS6Q68DC2 871 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 TXNDC8Q6A555 127 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ZFP1Q6P2D0 407 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ZNF549Q6P9A3 640 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 PGM2L1Q6PCE3 622 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 C1orf229Q6ZS94 237 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 USP45Q70EL2 814 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 CHSY3Q70JA7 882 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ADAMTSL2Q86TH1 951 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 CUZD1Q86UP6 607 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 TMC8Q8IU68 726 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 PGAM4Q8N0Y7 254 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 FBXO39Q8N4B4 442 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 PCDH20Q8N6Y1 951 aaKnown RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 PTGR2Q8N8N7 351 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 MDGA1Q8NFP4 955 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 OR2AP1Q8NGE2 309 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 RIN3Q8TB24 985 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ADAMTS19Q8TE59 1207 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 TSPEARQ8WU66 669 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 DLG3Q92796 817 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 VWCEQ96DN2 955 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 PRR11Q96HE9 360 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 PAWRQ96IZ0 340 aaKnown RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ZNF641Q96N77 438 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-243ENST00000488923 OR52B2Q96RD2 323 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 LYSMD1Q96S90 227 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 ATOH8Q96SQ7 321 aa6.58□□□□□ -1.36
HDLBP-243ENST00000488923 RAD9AQ99638 391 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms