RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 MORF4L2Q15014 288 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 MSS51Q4VC12 460 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 PCID2Q5JVF3 399 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 GPRC6AQ5T6X5 926 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 PDPK2PQ6A1A2 396 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 PSAPL1Q6NUJ1 521 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 HIBCHQ6NVY1 386 aaPredicted RBP10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CASC4Q6P4E1 433 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CRTC3Q6UUV7 619 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 KANSL1Q7Z3B3 1105 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 MAATS1Q7Z4T9 603 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CTAGE6Q86UF2 777 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CTAGE4Q8IX94 777 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 MNS1Q8NEH6 495 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 GDAP1Q8TB36 358 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 SAP25Q8TEE9 199 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 STYXQ8WUJ0 223 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 NAT14Q8WUY8 206 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 TBATAQ96M53 351 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 VPS35Q96QK1 796 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 ERP44Q9BS26 406 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CARD6Q9BX69 1037 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 OR2AG1Q9H205 316 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 ASB8Q9H765 288 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CARS2Q9HA77 564 aaKnown RBP10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CHRAC1Q9NRG0 131 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 SMOXQ9NWM0 555 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CRLS1Q9UJA2 301 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 CDV3Q9UKY7 258 aaKnown RBP10.95□□□□□ -0.66
UBE4B-210ENST00000488228 SUFUQ9UMX1 484 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 SLC17A4Q9Y2C5 497 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 PRKAB1Q9Y478 270 aa10.95□□□□□ -0.66
UBE4B-210ENST00000488228 AP3B1O00203 1094 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 YKT6O15498 198 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 FUCA1P04066 466 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 ZNF883P0CG24 379 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 MLNP12872 115 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 CD59P13987 128 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 HOXD11P31277 338 aaPredicted RBP10.94□□□□□ -0.66
UBE4B-210ENST00000488228 AKT1P31749 480 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 RXRGP48443 463 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 NPY2RP49146 381 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 CDKN1CP49918 316 aaPredicted RBP10.94□□□□□ -0.66
UBE4B-210ENST00000488228 LIMK1P53667 647 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 HNRNPKP61978 463 aaKnown RBP eCLIP10.94□□□□□ -0.66
UBE4B-210ENST00000488228 ACVR1Q04771 509 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 C1orf61Q13536 156 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 ITGA9Q13797 1035 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 TUBB2AQ13885 445 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 TRADDQ15628 312 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 RSPO4Q2I0M5 234 aaPredicted RBP10.94□□□□□ -0.66
UBE4B-210ENST00000488228 PLA2G4EQ3MJ16 856 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 PRRT3Q5FWE3 981 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 ZRANB3Q5FWF4 1079 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 FNBP1LQ5T0N5 605 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 DUPD1Q68J44 220 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 PCGF5Q86SE9 256 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 PNPLA1Q8N8W4 532 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 DDHD1Q8NEL9 900 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 ZNF398Q8TD17 642 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 LMX1AQ8TE12 382 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 BTN2A2Q8WVV5 523 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 HDAC10Q969S8 669 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 ZNF669Q96BR6 464 aaPredicted RBP10.94□□□□□ -0.66
UBE4B-210ENST00000488228 MFSD3Q96ES6 412 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 CDKN2AIPNLQ96HQ2 116 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 CAMK1GQ96NX5 476 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 WDR83Q9BRX9 315 aaKnown RBP10.94□□□□□ -0.66
UBE4B-210ENST00000488228 LRRC1Q9BTT6 524 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 TUBB2BQ9BVA1 445 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 KIFC1Q9BW19 673 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 SLC13A1Q9BZW2 595 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 TREX1Q9NSU2 369 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 GRHL1Q9NZI5 618 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 SAMD15Q9P1V8 674 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 ATXN10Q9UBB4 475 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 ANAPC5Q9UJX4 755 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 APPL1Q9UKG1 709 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 SOX13Q9UN79 622 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 MAD1L1Q9Y6D9 718 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 SLC30A1Q9Y6M5 507 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 DGKBQ9Y6T7 804 aa10.94□□□□□ -0.66
UBE4B-210ENST00000488228 PCNX2A6NKB5 2137 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 H7C0S8 307 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 TNFRSF10CO14798 259 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 AQP9O43315 295 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 PCDHGA12O60330 932 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 DFNA5O60443 496 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 DNAJC6O75061 913 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 GOT2P00505 430 aaKnown RBP10.93□□□□□ -0.66
UBE4B-210ENST00000488228 IVLP07476 585 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 ZNF8P17098 575 aaPredicted RBP10.93□□□□□ -0.66
UBE4B-210ENST00000488228 DGKAP23743 735 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 PSMA3P25788 255 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 ARNTP27540 789 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 FOXN2P32314 431 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 CTSCP53634 463 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 PRAMEP78395 509 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 ARHGAP8P85298 464 aa10.93□□□□□ -0.66
UBE4B-210ENST00000488228 CACNG1Q06432 222 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms