RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 KCNJ11Q14654 390 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 NR0B2Q15466 257 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 CHRNA6Q15825 494 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 PROX2Q3B8N5 592 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 ATP13A5Q4VNC0 1218 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 LRRC8BQ6P9F7 803 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 SNX20Q7Z614 316 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 TAF8Q7Z7C8 310 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 C17orf53Q8N3J3 647 aaPredicted RBP14.5□□□□□ -0.09
LIMS3-205ENST00000487150 AVL9Q8NBF6 648 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 MCUQ8NE86 351 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 ZNF398Q8TD17 642 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 GPBAR1Q8TDU6 330 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 CAMK1GQ96NX5 476 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 DDX47Q9H0S4 455 aaKnown RBP14.5□□□□□ -0.09
LIMS3-205ENST00000487150 CRLS1Q9UJA2 301 aa14.5□□□□□ -0.09
LIMS3-205ENST00000487150 CNOT6Q9ULM6 557 aaKnown RBP14.5□□□□□ -0.09
LIMS3-205ENST00000487150 TRIM38O00635 465 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 ZW10O43264 779 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 NUAK1O60285 661 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 KCNJ13O60928 360 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 CDK14O94921 469 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 GP1BAP07359 652 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 CKMT1AP12532 417 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 PSMA3P25788 255 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 AKT1P31749 480 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 ADCY8P40145 1251 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 PRAMEP78395 509 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 TRIP13Q15645 432 aaPredicted RBP14.49□□□□□ -0.09
LIMS3-205ENST00000487150 DEFB133Q30KQ1 61 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 PYCR3Q53H96 274 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 AARS2Q5JTZ9 985 aaKnown RBP14.49□□□□□ -0.09
LIMS3-205ENST00000487150 PCID2Q5JVF3 399 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 AFTPHQ6ULP2 937 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 MAATS1Q7Z4T9 603 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 PRUNE1Q86TP1 453 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 TRIM74Q86UV6 250 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 LRRTM4Q86VH4 590 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 HOOK3Q86VS8 718 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 PPIL6Q8IXY8 311 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 DCUN1D1Q96GG9 259 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 DNAJC1Q96KC8 554 aaKnown RBP14.49□□□□□ -0.09
LIMS3-205ENST00000487150 BOCQ9BWV1 1114 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 TMEM168Q9H0V1 697 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 TCEAL2Q9H3H9 227 aaPredicted RBP14.49□□□□□ -0.09
LIMS3-205ENST00000487150 ASB8Q9H765 288 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 VPS37BQ9H9H4 285 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 MRM3Q9HC36 420 aaKnown RBP14.49□□□□□ -0.09
LIMS3-205ENST00000487150 MRPL40Q9NQ50 206 aaKnown RBP14.49□□□□□ -0.09
LIMS3-205ENST00000487150 SAMD15Q9P1V8 674 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 FKBPLQ9UIM3 349 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 GPR34Q9UPC5 381 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 NEU2Q9Y3R4 380 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 TCAF1Q9Y4C2 921 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 GPSM3Q9Y4H4 160 aa14.49□□□□□ -0.09
LIMS3-205ENST00000487150 WDR87Q6ZQQ6 2873 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 QSOX1O00391 747 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 KMOO15229 486 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 YY2O15391 372 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 GRID2O43424 1007 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 BUD23O43709 281 aaKnown RBP14.48□□□□□ -0.09
LIMS3-205ENST00000487150 DNAJC6O75061 913 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 RFPL3O75679 317 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 FTH1P19P0C7X4 201 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 TPH1P17752 444 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 PAMP19021 973 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 MSH3P20585 1137 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 ACP1P24666 158 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 E2F1Q01094 437 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 CACNG1Q06432 222 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 C1orf61Q13536 156 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 GPRC6AQ5T6X5 926 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 TSTD2Q5T7W7 516 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 LYPLAL1Q5VWZ2 237 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 MARK2Q7KZI7 788 aaKnown RBP14.48□□□□□ -0.09
LIMS3-205ENST00000487150 TRAPPC5Q8IUR0 188 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 KLHL7Q8IXQ5 586 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 OR13C4Q8NGS5 318 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 WDR48Q8TAF3 677 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 SGSM3Q96HU1 749 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 APOLD1Q96LR9 279 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 TIMM29Q9BSF4 260 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 CLPBQ9H078 707 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 OR2AG1Q9H205 316 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 STN1Q9H668 368 aaKnown RBP14.48□□□□□ -0.09
LIMS3-205ENST00000487150 ATXN10Q9UBB4 475 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 ZNHIT2Q9UHR6 403 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 PNMA8BQ9ULN7 279 aaPredicted RBP14.48□□□□□ -0.09
LIMS3-205ENST00000487150 TMEM98Q9Y2Y6 226 aa14.48□□□□□ -0.09
LIMS3-205ENST00000487150 OAS3Q9Y6K5 1087 aaKnown RBP14.48□□□□□ -0.09
LIMS3-205ENST00000487150 COL5A1P20908 1838 aaPredicted RBP14.48□□□□□ -0.09
LIMS3-205ENST00000487150 KNL1Q8NG31 2342 aa14.47□□□□□ -0.09
LIMS3-205ENST00000487150 SPAARA0A1B0GVQ0 90 aa14.47□□□□□ -0.09
LIMS3-205ENST00000487150 MAGEB16A2A368 324 aa14.47□□□□□ -0.09
LIMS3-205ENST00000487150 GAPDHSO14556 408 aaPredicted RBP14.47□□□□□ -0.09
LIMS3-205ENST00000487150 CHUKO15111 745 aa14.47□□□□□ -0.09
LIMS3-205ENST00000487150 PFDN6O15212 129 aa14.47□□□□□ -0.09
LIMS3-205ENST00000487150 GSTM1P09488 218 aa14.47□□□□□ -0.09
LIMS3-205ENST00000487150 MC4RP32245 332 aa14.47□□□□□ -0.09
LIMS3-205ENST00000487150 ACTR1BP42025 376 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms