RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 TMCO3Q6UWJ1 677 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 C6orf15Q6UXA7 325 aaPredicted RBP14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 SLC9B2Q86UD5 537 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 RAVER1Q8IY67 606 aaKnown RBP14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 CCDC13Q8IYE1 715 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 MAML1Q92585 1016 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 SH3KBP1Q96B97 665 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 TDRD1Q9BXT4 1180 aaKnown RBP14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 TRIM55Q9BYV6 548 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 ZWILCHQ9H900 591 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 PCDH18Q9HCL0 1135 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 ATXN10Q9UBB4 475 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 CNOT8Q9UFF9 292 aaKnown RBP14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 CHKBQ9Y259 395 aa14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 TNRC6AQ8NDV7 1962 aaKnown RBP14.09□□□□□ -0.15
SDCCAG3-211ENST00000486441 SPTBP11277 2137 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 KIR2DS5A0A0G2JLQ3 304 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 A0A0G2JNG1 304 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 H3BRJ5 948 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 KIR2DS3K7RE56 304 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 SNX2O60749 519 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 TIAF1O95411 115 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 PYGLP06737 847 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 GZMAP12544 262 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 ZNF8P17098 575 aaPredicted RBP14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 XRCC1P18887 633 aaPredicted RBP14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 NFKBIAP25963 317 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 MAPK9P45984 424 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 LEPRP48357 1165 aaKnown RBP14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 SPINT3P49223 89 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 ARSEP51690 589 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 LAMB3Q13751 1172 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 KIR2DS5Q14953 304 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 ASB18Q6ZVZ8 466 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 TEX19Q8NA77 164 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 FAM71BQ8TC56 605 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 PCMTD1Q96MG8 357 aaPredicted RBP14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 RUFY1Q96T51 708 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 HERPUD2Q9BSE4 406 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 ULBP3Q9BZM4 244 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 EPB41L1Q9H4G0 881 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 HAUS4Q9H6D7 363 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 UCK1Q9HA47 277 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 LRRC4CQ9HCJ2 640 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 PLEKHB1Q9UF11 243 aaPredicted RBP14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 PCDHGA6Q9Y5G7 932 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 POLEQ07864 2286 aa14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 ANKRD17O75179 2603 aaKnown RBP14.08□□□□□ -0.16
SDCCAG3-211ENST00000486441 DNAJB5O75953 348 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 KIAA0754O94854 1291 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 RECKO95980 971 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 MMP2P08253 660 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 CD48P09326 243 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 FGF5P12034 268 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 BRAFP15056 766 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 TYRP1P17643 537 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 GNLYP22749 145 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 MAN1A1P33908 653 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 PMS2P54278 862 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 SLC25A11Q02978 314 aaKnown RBP14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 FOXM1Q08050 763 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 MMRN1Q13201 1228 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 SEPT6Q14141 434 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 FAM182AQ5T1J6 154 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 TMEM26Q6ZUK4 368 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 PLXDC1Q8IUK5 500 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 APLFQ8IW19 511 aaPredicted RBP14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 ATPAF2Q8N5M1 289 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 AOPEPQ8N6M6 819 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 LRRN4Q8WUT4 740 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 KLHL6Q8WZ60 621 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 HSPH1Q92598 858 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 OR6C1Q96RD1 312 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 CARD9Q9H257 536 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 ZNF768Q9H5H4 540 aaKnown RBP14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 RMI1Q9H9A7 625 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 ARFGAP3Q9NP61 516 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 MLXIPLQ9NP71 852 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 MYO6Q9UM54 1294 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 POLHQ9Y253 713 aa14.07□□□□□ -0.16
SDCCAG3-211ENST00000486441 OR5K4A6NMS3 321 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 MKRN2OSH3BPM6 223 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 CHUKO15111 745 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 GRID2O43424 1007 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 SEMA7AO75326 666 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 SPAG6O75602 509 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 CREG1O75629 220 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 DESP17661 470 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 ARL4AP40617 200 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 SEPHS1P49903 392 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 GALNT2Q10471 571 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 SEMA5AQ13591 1074 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 QPCTQ16769 361 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 PPP1R2P3Q6NXS1 205 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 ATCAYQ86WG3 371 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 BBS5Q8N3I7 341 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 RSC1A1Q92681 617 aa14.06□□□□□ -0.16
SDCCAG3-211ENST00000486441 POLR1EQ9GZS1 481 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms