RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 PIRTP0C851 137 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 SKOR2Q2VWA4 1001 aaPredicted RBP25.43■■□□□ 1.66
HLA-F-227ENST00000485513 IYDQ6PHW0 289 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 ZSCAN1Q8NBB4 408 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 ART4Q93070 314 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 HERPUD2Q9BSE4 406 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 ANP32EQ9BTT0 268 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 BRD8Q9H0E9 1235 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 SLC25A51Q9H1U9 297 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 MAGEE1Q9HCI5 957 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 DDX56Q9NY93 547 aaKnown RBP25.43■■□□□ 1.66
HLA-F-227ENST00000485513 SHOC2Q9UQ13 582 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 PCDHGA4Q9Y5G9 962 aa25.43■■□□□ 1.66
HLA-F-227ENST00000485513 GRID2O43424 1007 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 NUAK1O60285 661 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 SNX2O60749 519 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 TNNT1P13805 278 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 SLC2A4P14672 509 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 SLC1A1P43005 524 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 DYNLT1P63172 113 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 NFATC2Q13469 925 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 PCSK7Q16549 785 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 ZNF569Q5MCW4 686 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 ALS2CLQ60I27 953 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 RHOT1Q8IXI2 618 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 JPH3Q8WXH2 748 aaPredicted RBP25.42■■□□□ 1.66
HLA-F-227ENST00000485513 PMEPA1Q969W9 287 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 SH3KBP1Q96B97 665 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 ZSCAN5AQ9BUG6 496 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 ARFGAP3Q9NP61 516 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 RAD18Q9NS91 495 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 PDP2Q9P2J9 529 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 ATXN10Q9UBB4 475 aa25.42■■□□□ 1.66
HLA-F-227ENST00000485513 A6NCN8 305 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 B8ZZF3 427 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 SLC25A14O95258 325 aaPredicted RBP25.41■■□□□ 1.66
HLA-F-227ENST00000485513 SLC4A1P02730 911 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 ITGB2P05107 769 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 ZNF8P17098 575 aaPredicted RBP25.41■■□□□ 1.66
HLA-F-227ENST00000485513 ARSDP51689 593 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 DCDC1P59894 354 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 CDK18Q07002 472 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 SLC14A2Q15849 920 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 B4GALNT4Q76KP1 1039 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 TMC3Q7Z5M5 1100 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 SLC9B2Q86UD5 537 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 FAM129CQ86XR2 697 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 PHYKPLQ8IUZ5 450 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 GPR26Q8NDV2 337 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 TADA1Q96BN2 335 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 DDA1Q9BW61 102 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 GPR63Q9BZJ6 419 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 OR2AG1Q9H205 316 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 SLC39A1Q9NY26 324 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 ZNF711Q9Y462 761 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 HYOU1Q9Y4L1 999 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 B3GALT1Q9Y5Z6 326 aa25.41■■□□□ 1.66
HLA-F-227ENST00000485513 KIR2DS5A0A0G2JLQ3 304 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 A0A0G2JNG1 304 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 KIR2DS3K7RE56 304 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 ZIC2O95409 532 aaPredicted RBP25.4■■□□□ 1.66
HLA-F-227ENST00000485513 F3P13726 295 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 WT1P19544 449 aaPredicted RBP25.4■■□□□ 1.66
HLA-F-227ENST00000485513 ATP1A2P50993 1020 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 KIR2DS5Q14953 304 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 LINC00303Q3SY05 128 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 SNAP47Q5SQN1 464 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 ZNF648Q5T619 568 aaPredicted RBP25.4■■□□□ 1.66
HLA-F-227ENST00000485513 WDR74Q6RFH5 385 aaPredicted RBP25.4■■□□□ 1.66
HLA-F-227ENST00000485513 XKR5Q6UX68 686 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 MFSD7Q6UXD7 560 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 EXD3Q8N9H8 876 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 SPATA22Q8NHS9 363 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 EXTL1Q92935 676 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 ARHGAP9Q9BRR9 750 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 ASPSCR1Q9BZE9 553 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 GLOD4Q9HC38 313 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 TRIM39Q9HCM9 518 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 OCIAD1Q9NX40 245 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 NFKBIL1Q9UBC1 381 aaPredicted RBP25.4■■□□□ 1.66
HLA-F-227ENST00000485513 INTUQ9ULD6 942 aa25.4■■□□□ 1.66
HLA-F-227ENST00000485513 OR5K4A6NMS3 321 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 EFCAB7A8K855 629 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 B4E171 279 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 J3QKU1 62 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 SPOPO43791 374 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 MT-CYBP00156 380 aaPredicted RBP25.39■■□□□ 1.66
HLA-F-227ENST00000485513 TSPAN7P41732 249 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 TEX44Q53QW1 395 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 PDPK2PQ6A1A2 396 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 CCDC70Q6NSX1 233 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 TRAM1L1Q8N609 369 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 NCSTNQ92542 709 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 NKD1Q969G9 470 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 GLYATL1Q969I3 302 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 LDHAL6BQ9BYZ2 381 aaPredicted RBP25.39■■□□□ 1.66
HLA-F-227ENST00000485513 TSPY26PQ9H489 355 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 ADGRG1Q9Y653 693 aa25.39■■□□□ 1.66
HLA-F-227ENST00000485513 A0A0A6YYK5 440 aaPredicted RBP25.38■■□□□ 1.65
HLA-F-227ENST00000485513 A8MU76 341 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms