RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 PAIP1Q9H074 479 aaKnown RBP3.99□□□□□ -1.77
SMC4-215ENST00000484799 PRKRIP1Q9H875 184 aaPredicted RBP3.99□□□□□ -1.77
SMC4-215ENST00000484799 BLOC1S4Q9NUP1 217 aa3.99□□□□□ -1.77
SMC4-215ENST00000484799 OGFRQ9NZT2 677 aa3.99□□□□□ -1.77
SMC4-215ENST00000484799 ARHGAP26Q9UNA1 814 aa3.99□□□□□ -1.77
SMC4-215ENST00000484799 KLHL20Q9Y2M5 609 aa3.99□□□□□ -1.77
SMC4-215ENST00000484799 TDRD9Q8NDG6 1382 aaKnown RBP3.99□□□□□ -1.77
SMC4-215ENST00000484799 PTPRCP08575 1304 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 SYNGR3O43761 229 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 ZBED4O75132 1171 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 RTN3O95197 1032 aaPredicted RBP3.98□□□□□ -1.77
SMC4-215ENST00000484799 ATP1A3P13637 1013 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 CHMP24386 653 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 NR2F2P24468 414 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 CHRNB4P30926 498 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 MLLT10P55197 1068 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 USP41Q3LFD5 358 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 C14orf177Q52M58 125 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 STXBP5Q5T5C0 1151 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 PCDH20Q8N6Y1 951 aaKnown RBP3.98□□□□□ -1.77
SMC4-215ENST00000484799 STPG4Q8N801 248 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 UCMAQ8WVF2 138 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 TM9SF4Q92544 642 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 ZNF501Q96CX3 271 aaPredicted RBP3.98□□□□□ -1.77
SMC4-215ENST00000484799 SAAL1Q96ER3 474 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 LINGO1Q96FE5 620 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 SCRN2Q96FV2 425 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 TIGD1Q96MW7 591 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 TMEM47Q9BQJ4 181 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 PCGF1Q9BSM1 259 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 AGXT2Q9BYV1 514 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 USP44Q9H0E7 712 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 LRMDAQ9H2I8 198 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 PDCL3Q9H2J4 239 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 RANBP17Q9H2T7 1088 aaKnown RBP3.98□□□□□ -1.77
SMC4-215ENST00000484799 TCP11L1Q9NUJ3 509 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 HSPB7Q9UBY9 170 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 AASSQ9UDR5 926 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 FBXL2Q9UKC9 423 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 KCNK7Q9Y2U2 307 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 CYP46A1Q9Y6A2 500 aa3.98□□□□□ -1.77
SMC4-215ENST00000484799 IGKV3D-20A0A0C4DH25 116 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 BLOC1S5-TXNDC5H3BN57 136 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 HOXB5P09067 269 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 HNRNPA1P09651 372 aaKnown RBP eCLIP3.97□□□□□ -1.77
SMC4-215ENST00000484799 PAX1P15863 534 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 ZNF23P17027 643 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 GGT5P36269 586 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 NR0B1P51843 470 aaKnown RBP3.97□□□□□ -1.77
SMC4-215ENST00000484799 TAS2R38P59533 333 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 DCAF7P61962 342 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 C6orf141Q5SZD1 244 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 ZNF704Q6ZNC4 412 aaPredicted RBP3.97□□□□□ -1.77
SMC4-215ENST00000484799 FASTKD5Q7L8L6 764 aaKnown RBP3.97□□□□□ -1.77
SMC4-215ENST00000484799 SRBD1Q8N5C6 995 aaKnown RBP3.97□□□□□ -1.77
SMC4-215ENST00000484799 PDILTQ8N807 584 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 TDRD7Q8NHU6 1098 aaKnown RBP3.97□□□□□ -1.77
SMC4-215ENST00000484799 ZUFSPQ96AP4 578 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 FSD1Q9BTV5 496 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 KCNN2Q9H2S1 579 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 BICC1Q9H694 974 aaKnown RBP3.97□□□□□ -1.77
SMC4-215ENST00000484799 MMP25Q9NPA2 562 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 KCND2Q9NZV8 630 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 SLC25A10Q9UBX3 287 aaPredicted RBP3.97□□□□□ -1.77
SMC4-215ENST00000484799 HAO1Q9UJM8 370 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 JRKLQ9Y4A0 524 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 TTLL3Q9Y4R7 772 aa3.97□□□□□ -1.77
SMC4-215ENST00000484799 SMIM1B2RUZ4 78 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 FAM106CPP0CH98 169 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 FGF5P12034 268 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 PSMA4P25789 261 aaKnown RBP3.96□□□□□ -1.78
SMC4-215ENST00000484799 MAD2L1Q13257 205 aaPredicted RBP3.96□□□□□ -1.78
SMC4-215ENST00000484799 PPIGQ13427 754 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMC4-215ENST00000484799 SLC1A5Q15758 541 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 SLC9B1Q4ZJI4 515 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 FAM69AQ5T7M9 428 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 SLC9C2Q5TAH2 1124 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 CCDC30Q5VVM6 783 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 FRG2Q64ET8 278 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 ITPRIPL1Q6GPH6 555 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 BRAT1Q6PJG6 821 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 CCDC13Q8IYE1 715 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 OR2AK2Q8NG84 335 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 OR52I2Q8NH67 350 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 THAP6Q8TBB0 222 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 LGALS12Q96DT0 336 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 RNF125Q96EQ8 232 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 FUZQ9BT04 418 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 TKTL2Q9H0I9 626 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 PLEKHA4Q9H4M7 779 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 TFB2MQ9H5Q4 396 aaKnown RBP3.96□□□□□ -1.78
SMC4-215ENST00000484799 ACSS1Q9NUB1 689 aaPredicted RBP3.96□□□□□ -1.78
SMC4-215ENST00000484799 NSMCE4AQ9NXX6 385 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 ORC3Q9UBD5 711 aaPredicted RBP3.96□□□□□ -1.78
SMC4-215ENST00000484799 NRBP1Q9UHY1 535 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 ACSL5Q9ULC5 683 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 MMP24Q9Y5R2 645 aa3.96□□□□□ -1.78
SMC4-215ENST00000484799 A0A1W2PPH5 198 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 PGPEP1LA6NFU8 196 aa3.95□□□□□ -1.78
SMC4-215ENST00000484799 HHLA1C9JL84 531 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms