RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 GPTP24298 496 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 CLK1P49759 484 aaKnown RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 BMXP51813 675 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 CAPZA1P52907 286 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 RAD23BP54727 409 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 PROK1P58294 105 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 ZNF268Q14587 947 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 SLC9C1Q4G0N8 1177 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 MEX3CQ5U5Q3 659 aaKnown RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 HEPHL1Q6MZM0 1159 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 TMEM71Q6P5X7 295 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 FAM43BQ6ZT52 329 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 C1QL2Q7Z5L3 287 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 AFAP1Q8N556 730 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 TEX45Q8NA69 505 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 C8orf58Q8NAV2 365 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 SPC24Q8NBT2 197 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 AGBL3Q8NEM8 1001 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 FIBINQ8TAL6 211 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 CEP76Q8TAP6 659 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 ADAMTS14Q8WXS8 1223 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 DDB2Q92466 427 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 CORO2AQ92828 525 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 EME1Q96AY2 570 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 EGFL8Q99944 293 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 FERMT1Q9BQL6 677 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 SH2D3AQ9BRG2 576 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 FUT8Q9BYC5 575 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 GOLPH3LQ9H4A5 285 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 KLHL31Q9H511 634 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 ESRP2Q9H6T0 727 aaKnown RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 AAMDCQ9H7C9 122 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 GPR108Q9NPR9 543 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 DDX43Q9NXZ2 648 aaKnown RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-211ENST00000484581 OR14J1Q9UGF5 321 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 LIPT1Q9Y234 373 aa4.52□□□□□ -1.69
VPS13A-211ENST00000484581 ZNF541Q9H0D2 1346 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 A0A087WV48 116 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 TRBV5-3A0A0A0MS03 114 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 TMEM8BA6NDV4 472 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 ANXA2P2A6NMY6 339 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 ENO4A6NNW6 628 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 H0YIN7 160 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 HTATSF1O43719 755 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 PRKCGP05129 697 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 CELA2AP08217 269 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 LINGO3P0C6S8 592 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 SUPT20HL2P0C7V6 817 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 CBSLP0DN79 551 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 SRCP12931 536 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 ACHEP22303 614 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 CALRP27797 417 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 CBSP35520 551 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 ATP6V1E1P36543 226 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 METAP2P50579 478 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 CDH12P55289 794 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 RPS13P62277 151 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 YWHAHQ04917 246 aaPredicted RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 PPIGQ13427 754 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 STIM1Q13586 685 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 NFE2L1Q14494 772 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 KRT33BQ14525 404 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 EZH2Q15910 746 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 MEP1BQ16820 701 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 SUPT20HL1Q3ZLR7 823 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 ZRANB3Q5FWF4 1079 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 C6orf10Q5SRN2 563 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 ASPHD1Q5U4P2 390 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 GGNBP1Q5YKI7 109 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 KRT39Q6A163 491 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 FCRLBQ6BAA4 426 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 METTL2BQ6P1Q9 378 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 PPP1R21Q6ZMI0 780 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 INTS8Q75QN2 995 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 OTOAQ7RTW8 1153 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 SPATA19Q7Z5L4 167 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 PATL1Q86TB9 770 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 FAM217AQ8IXS0 508 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 GALNT16Q8N428 558 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 OR8H1Q8NGG4 311 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 TMEM163Q8TC26 289 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 KCNE4Q8WWG9 221 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 IGFBPL1Q8WX77 278 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 SNX21Q969T3 373 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 METTL2AQ96IZ6 378 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 CCDC43Q96MW1 224 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 ABHD6Q9BV23 337 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 PPIL3Q9H2H8 161 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 PPP1R3EQ9H7J1 279 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 NOL11Q9H8H0 719 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 CNOT10Q9H9A5 744 aaKnown RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 THSD1Q9NS62 852 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 SIRT3Q9NTG7 399 aaPredicted RBP4.51□□□□□ -1.69
VPS13A-211ENST00000484581 ADPRHL2Q9NX46 363 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 COQ3Q9NZJ6 369 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 TSPYL4Q9UJ04 414 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 KLHL20Q9Y2M5 609 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 GPRASP1Q5JY77 1395 aa4.51□□□□□ -1.69
VPS13A-211ENST00000484581 GTPBP10A4D1E9 387 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms