RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 STK10O94804 968 aaKnown RBP12.16□□□□□ -0.46
MSH5-216ENST00000484309 SLC25A14O95258 325 aaPredicted RBP12.16□□□□□ -0.46
MSH5-216ENST00000484309 EML2O95834 649 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 GLB1P16278 677 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 ZNF8P17098 575 aaPredicted RBP12.16□□□□□ -0.46
MSH5-216ENST00000484309 HLA-DPA1P20036 260 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 DCDC1P59894 354 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 KLF1Q13351 362 aaPredicted RBP12.16□□□□□ -0.46
MSH5-216ENST00000484309 BIRC2Q13490 618 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 SPARCL1Q14515 664 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 FAM151BQ6UXP7 276 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 SPRED1Q7Z699 444 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 ZNF761Q86XN6 746 aaPredicted RBP12.16□□□□□ -0.46
MSH5-216ENST00000484309 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 RNF10Q8N5U6 811 aaKnown RBP12.16□□□□□ -0.46
MSH5-216ENST00000484309 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 OR6C4Q8NGE1 309 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 HNRNPLLQ8WVV9 542 aaKnown RBP12.16□□□□□ -0.46
MSH5-216ENST00000484309 ATG4AQ8WYN0 398 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 GLYATL1Q969I3 302 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 SPATA13Q96N96 652 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 TSGA10Q9BZW7 698 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 EPB41L5Q9HCM4 733 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 VPS18Q9P253 973 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 TMPRSS11EQ9UL52 423 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 ZFYVE26Q68DK2 2539 aa12.16□□□□□ -0.46
MSH5-216ENST00000484309 RHPN2P1A8MT19 583 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 GRID2O43424 1007 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 NUAK1O60285 661 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 SNX2O60749 519 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 EPOP01588 193 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 ALDH4A1P30038 563 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 CA5AP35218 305 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 HMGCLP35914 325 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 GDF10P55107 478 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 OR1D5P58170 312 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 CCZ1BP86790 482 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 CCZ1P86791 482 aaPredicted RBP12.15□□□□□ -0.46
MSH5-216ENST00000484309 PRPSAP1Q14558 356 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 AMZ1Q400G9 498 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 ATP13A5Q4VNC0 1218 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 KHDC1Q4VXA5 237 aaKnown RBP12.15□□□□□ -0.46
MSH5-216ENST00000484309 SEL1L2Q5TEA6 688 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 ARHGEF18Q6ZSZ5 1173 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 ADGRG6Q86SQ4 1221 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 PHYKPLQ8IUZ5 450 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 LRRC8AQ8IWT6 810 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 FAM71DQ8N9W8 422 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 GDAP1Q8TB36 358 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 SRPK1Q96SB4 655 aaKnown RBP12.15□□□□□ -0.46
MSH5-216ENST00000484309 TMEM121Q9BTD3 319 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 POLR1BQ9H9Y6 1135 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 RAD18Q9NS91 495 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 HACD3Q9P035 362 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 IL17CQ9P0M4 197 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 NFKBIL1Q9UBC1 381 aaPredicted RBP12.15□□□□□ -0.46
MSH5-216ENST00000484309 APPL1Q9UKG1 709 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 KCTD3Q9Y597 815 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 ARL5AQ9Y689 179 aa12.15□□□□□ -0.46
MSH5-216ENST00000484309 FAM208BQ5VWN6 2430 aa12.15□□□□□ -0.47
MSH5-216ENST00000484309 PPM1DO15297 605 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 B4GAT1O43505 415 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 NUDT21O43809 227 aaKnown RBP12.14□□□□□ -0.47
MSH5-216ENST00000484309 UGT1A9O60656 530 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 CCDC175P0C221 793 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 UGT1A6P19224 532 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 UGT1A1P22309 533 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 UGT1A4P22310 534 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 ADRA1AP35348 466 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 UGT1A3P35503 534 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 UGT1A5P35504 534 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 SPAM1P38567 509 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 PPM1FP49593 454 aaPredicted RBP12.14□□□□□ -0.47
MSH5-216ENST00000484309 B4GALNT1Q00973 533 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 LRP8Q14114 963 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 CHRNA6Q15825 494 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 MAP9Q49MG5 647 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 MICALCLQ6ZW33 695 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 TMPRSS9Q7Z410 1059 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 C17orf82Q86X59 251 aaPredicted RBP12.14□□□□□ -0.47
MSH5-216ENST00000484309 TTC13Q8NBP0 860 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 WDR48Q8TAF3 677 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 SLC37A2Q8TED4 501 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 CRELD1Q96HD1 420 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 NAF1Q96HR8 494 aaKnown RBP12.14□□□□□ -0.47
MSH5-216ENST00000484309 PLEKHG4BQ96PX9 1271 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 TBL1YQ9BQ87 522 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 CARD9Q9H257 536 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 OSGEPL1Q9H4B0 414 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 TRABDQ9H4I3 376 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 UGT1A7Q9HAW7 530 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 UGT1A10Q9HAW8 530 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 UGT1A8Q9HAW9 530 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 RDH14Q9HBH5 336 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 TRIM39Q9HCM9 518 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 IL26Q9NPH9 171 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 KLC4Q9NSK0 619 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 TBC1D29Q9UFV1 150 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 DNAJC16Q9Y2G8 782 aa12.14□□□□□ -0.47
MSH5-216ENST00000484309 AAR2Q9Y312 384 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms