RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 NR6A1Q15406 480 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 UGT8Q16880 541 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 CLEC16AQ2KHT3 1053 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 RFX8Q6ZV50 586 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 MON1BQ7L1V2 547 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 PHF13Q86YI8 300 aaPredicted RBP10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 EXD1Q8NHP7 514 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 PIH1D2Q8WWB5 315 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 PLEKHG4BQ96PX9 1271 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 PEBP4Q96S96 227 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 KCTD15Q96SI1 283 aaPredicted RBP10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 HERPUD2Q9BSE4 406 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 BRD8Q9H0E9 1235 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 ING2Q9H160 280 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 EPB41L1Q9H4G0 881 aa10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 SCHIP1Q9P0W5 487 aaPredicted RBP10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 CNOT6Q9ULM6 557 aaKnown RBP10.74□□□□□ -0.69
SMARCC1-205ENST00000483847 F8P00451 2351 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 KIR2DS5A0A0G2JLQ3 304 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 A0A0G2JNG1 304 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 C21orf140B9A014 251 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 KIR2DS3K7RE56 304 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 PES1O00541 588 aaKnown RBP10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 DAPK3O43293 454 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 RASSF9O75901 435 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 UBXN7O94888 489 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 CALB1P05937 261 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 PRF1P14222 555 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 NFKBIAP25963 317 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 PTGIRP43119 386 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 KIR2DS5Q14953 304 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 TPD52L1Q16890 204 aaPredicted RBP10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 SLC6A19Q695T7 634 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 PWWP2BQ6NUJ5 590 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 DNAJC24Q6P3W2 148 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 TRIM72Q6ZMU5 477 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 USP45Q70EL2 814 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 ZNF765Q7L2R6 523 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 ARFGAP1Q8N6T3 406 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 RBMXL3Q8N7X1 1067 aaKnown RBP10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 RSC1A1Q92681 617 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 ZNF599Q96NL3 588 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 SNRNP25Q9BV90 132 aaKnown RBP10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 SLC29A3Q9BZD2 475 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 SLAMF7Q9NQ25 335 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 ACSS2Q9NR19 701 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 VPS18Q9P253 973 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 ZNF624Q9P2J8 865 aaPredicted RBP10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 PPIL1Q9Y3C6 166 aa10.73□□□□□ -0.69
SMARCC1-205ENST00000483847 CROCCQ5TZA2 2017 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 ANKRD62A6NC57 917 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 FADS2P1A8MWK0 482 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 EPHB6O15197 1021 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 TOX3O15405 576 aaPredicted RBP10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 CEACAM4O75871 244 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 CBX6O95503 412 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 PTPN4P29074 926 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 SOX5P35711 763 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 STC1P52823 247 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 JAM2P57087 298 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 PPP1CAP62136 330 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 IHHQ14623 411 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 KCNAB1Q14722 419 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 CHRNA6Q15825 494 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 CAMK4Q16566 473 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 PPP6R3Q5H9R7 873 aaPredicted RBP10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 ARMC12Q5T9G4 340 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 CACHD1Q5VU97 1274 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 FAM92BQ6ZTR7 304 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 TMEM26Q6ZUK4 368 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 CYP4V2Q6ZWL3 525 aaPredicted RBP10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 PRSS42Q7Z5A4 293 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 NLRP8Q86W28 1048 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 PPP1R3BQ86XI6 285 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 THAP4Q8WY91 577 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 KLHL6Q8WZ60 621 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 WDR24Q96S15 920 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 MGME1Q9BQP7 344 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 NUDT9Q9BW91 350 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 NLRC4Q9NPP4 1024 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 PCSK1NQ9UHG2 260 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 SLC5A6Q9Y289 635 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 ZNF451Q9Y4E5 1061 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 CSMD2Q7Z408 3487 aa10.72□□□□□ -0.69
SMARCC1-205ENST00000483847 A0A0J9YYE9 177 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 OR5K4A6NMS3 321 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 FZD6O60353 706 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 MAFKO60675 156 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 DPM1O60762 260 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 LRCH4O75427 683 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 TACC2O95359 2948 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 TRBC1P01850 177 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 MT-ND3P03897 115 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 SLC2A4P14672 509 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 FOLR1P15328 257 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 HIVEP1P15822 2718 aa10.71□□□□□ -0.69
SMARCC1-205ENST00000483847 AMD1P17707 334 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms