RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NRXN2Q9P2S2 1712 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 CCDC162PA2VCL2 907 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 AQP12BA6NM10 295 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 E9PAM4 449 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 SOAT2O75908 522 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 MMP3P08254 477 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 HAPLN1P10915 354 aaPredicted RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 IDO1P14902 403 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 OR1E1P30953 314 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 HALP42357 657 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 BCAP31P51572 246 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 OR4D1Q15615 310 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ITIH5Q86UX2 942 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 AQP12AQ8IXF9 295 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ADGRG5Q8IZF4 528 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 SLC9A7Q96T83 725 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 NFKBIZQ9BYH8 718 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 ROGDIQ9GZN7 287 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 LEF1Q9UJU2 399 aaPredicted RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 BLOC1S6Q9UL45 172 aa12.64□□□□□ -0.39
VPS52-218ENST00000482399 POLR3HQ9Y535 204 aaPredicted RBP12.64□□□□□ -0.39
VPS52-218ENST00000482399 TTC3P53804 2025 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 G3V2T6 193 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 FKBP9O95302 570 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 C1RP00736 705 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 GPX3P22352 226 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 TWF1Q12792 350 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 PRKG2Q13237 762 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 C10orf120Q5SQS8 335 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 DCDC5Q6ZRR9 648 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 LARP4Q71RC2 724 aaKnown RBP eCLIP12.63□□□□□ -0.39
VPS52-218ENST00000482399 FKBP9P1Q75LS8 142 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 KIAA2013Q8IYS2 634 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 PELI3Q8N2H9 469 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 NTAN1Q96AB6 310 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 BIRC8Q96P09 236 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
VPS52-218ENST00000482399 LHPPQ9H008 270 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 ITM2CQ9NQX7 267 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 CATSPERZQ9NTU4 200 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 SLC38A7Q9NVC3 462 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 TRMT6Q9UJA5 497 aaKnown RBP12.63□□□□□ -0.39
VPS52-218ENST00000482399 RRN3P2A6NIE6 340 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 IQCF5A8MTL0 148 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 BTBD19C9JJ37 291 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 MAFKO60675 156 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 S100BP04271 92 aaPredicted RBP12.63□□□□□ -0.39
VPS52-218ENST00000482399 TTKP33981 857 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 RPL38P63173 70 aaKnown RBP12.63□□□□□ -0.39
VPS52-218ENST00000482399 TMEM207Q6UWW9 146 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 MAMDC4Q6UXC1 1216 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 ANKRD46Q86W74 232 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 DCP1BQ8IZD4 617 aaKnown RBP12.63□□□□□ -0.39
VPS52-218ENST00000482399 STAG3L4Q8TBR4 150 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 TBC1D15Q8TC07 691 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 NANOGQ9H9S0 305 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 AMBNQ9NP70 447 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 LATS2Q9NRM7 1088 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 RIC8BQ9NVN3 520 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 TAS2R13Q9NYV9 303 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 SEPT3Q9UH03 358 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 VPS51Q9UID3 782 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 CNOT11Q9UKZ1 510 aaKnown RBP12.63□□□□□ -0.39
VPS52-218ENST00000482399 ACTL7AQ9Y615 435 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 COL4A5P29400 1685 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 MCM3APO60318 1980 aa12.63□□□□□ -0.39
VPS52-218ENST00000482399 TARM1B6A8C7 271 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 KPNA4O00629 521 aaPredicted RBP12.62□□□□□ -0.39
VPS52-218ENST00000482399 DIRAS1O95057 198 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 AGXTP21549 392 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 MYF6P23409 242 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 POLR2IP36954 125 aaKnown RBP12.62□□□□□ -0.39
VPS52-218ENST00000482399 TIGD5Q53EQ6 642 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 MARCH8Q5T0T0 291 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 OVOS1Q6IE37 1185 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 FAM45BPQ6NSW5 357 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 THAP5Q7Z6K1 395 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 TOP6BLQ8N6T0 577 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 FAM45AQ8TCE6 357 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 RORBQ92753 470 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 ISL2Q96A47 359 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 SLC2A13Q96QE2 648 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 TRMOQ9BU70 441 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 AP5M1Q9H0R1 490 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 TOR3AQ9H497 397 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 COMMD8Q9NX08 183 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 KIF17Q9P2E2 1029 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 CD300AQ9UGN4 299 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 ADGRE2Q9UHX3 823 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 A0A1W2PQH9 124 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 STAU1O95793 577 aaKnown RBP12.62□□□□□ -0.39
VPS52-218ENST00000482399 GPIP06744 558 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 ZNF37AP17032 561 aaPredicted RBP12.62□□□□□ -0.39
VPS52-218ENST00000482399 FMO3P31513 532 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 RFC2P35250 354 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 ATP6V0D1P61421 351 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 DAB2P98082 770 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 TSTA3Q13630 321 aaPredicted RBP12.62□□□□□ -0.39
VPS52-218ENST00000482399 AAK1Q2M2I8 961 aa12.62□□□□□ -0.39
VPS52-218ENST00000482399 DENND5AQ6IQ26 1287 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms