RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 OVGP1Q12889 678 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 CUL1Q13616 776 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 CCNIQ14094 377 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 CRYMQ14894 314 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 RRS1Q15050 365 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 PTPAQ15257 358 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 SLC5A9Q2M3M2 681 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 HERC4Q5GLZ8 1057 aaPredicted RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 COLEC12Q5KU26 742 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 TEDDM1Q5T9Z0 273 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 GKAP1Q5VSY0 366 aaPredicted RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 CST9LP1Q5W188 147 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 RINT1Q6NUQ1 792 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 MIS18BP1Q6P0N0 1132 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 VWA1Q6PCB0 445 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 NHLRC1Q6VVB1 395 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 TRIM72Q6ZMU5 477 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 MSANTD1Q6ZTZ1 278 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 ERN2Q76MJ5 926 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 KCTD20Q7Z5Y7 419 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 DTX2Q86UW9 622 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 COMTD1Q86VU5 262 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 SLC43A2Q8N370 569 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 RNF10Q8N5U6 811 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 B3GALNT2Q8NCR0 500 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 LPCAT1Q8NF37 534 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 BCAS4Q8TDM0 211 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 LRRC8CQ8TDW0 803 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 GLMPQ8WWB7 406 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 ARHGAP45Q92619 1136 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 BCL2L2Q92843 193 aaPredicted RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 SMARCE1Q969G3 411 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 FBXO32Q969P5 355 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 INTS12Q96CB8 462 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 CCDC51Q96ER9 411 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 MCRS1Q96EZ8 462 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 FBXL20Q96IG2 436 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 PGBD1Q96JS3 809 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 FAM227BQ96M60 508 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 CAMK1GQ96NX5 476 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 PSKH2Q96QS6 385 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 USP28Q96RU2 1077 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 NAP1L3Q99457 506 aaPredicted RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 PAFAH2Q99487 392 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 RAD9AQ99638 391 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 MECRQ9BV79 373 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 PINK1Q9BXM7 581 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 ACTRT3Q9BYD9 372 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 MRPL37Q9BZE1 423 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 SCAND2PQ9GZW5 306 aaPredicted RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 SERHL2Q9H4I8 314 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 ZBTB26Q9HCK0 441 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 SLC2A4RGQ9NR83 387 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 SDHAF3Q9NRP4 125 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 SPATS2LQ9NUQ6 558 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.15□□□□□ -1.75
VPS41-212ENST00000482217 EHD3Q9NZN3 535 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 TESQ9UGI8 421 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 AMACRQ9UHK6 382 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 OSGIN1Q9UJX0 560 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 NENFQ9UMX5 172 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 CNTN6Q9UQ52 1028 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 REXO2Q9Y3B8 237 aaKnown RBP4.15□□□□□ -1.75
VPS41-212ENST00000482217 LIPGQ9Y5X9 500 aa4.15□□□□□ -1.75
VPS41-212ENST00000482217 DHX29Q7Z478 1369 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 A0A1W2PQF6 199 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 A0A1W2PQM1 296 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 A8MZ25 164 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 EIF3CLB5ME19 914 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 KIF28PB7ZC32 967 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 FAM86B1E9PN63 330 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 RASGRF2O14827 1237 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ATP2A1O14983 1001 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 HDAC3O15379 428 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 RGS10O43665 173 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 NARSO43776 548 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 TSPAN1O60635 241 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 NIPSNAP2O75323 286 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 RPP40O75818 363 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 GLP2RO95838 553 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 URODP06132 367 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 GLAP06280 429 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 ABHD2P08910 425 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 WEE2P0C1S8 567 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 UBTFL6P0CB48 400 aaPredicted RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 ITGAMP11215 1152 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 MAKP20794 623 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 SFNP31947 248 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 CDKN1AP38936 164 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 FASLGP48023 281 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 STAT2P52630 851 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 CDH15P55291 814 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 TIRAPP58753 221 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 STX1BP61266 288 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 RPL7AP62424 266 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 TEFQ10587 303 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 KLF10Q13118 480 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 AIMP2Q13155 320 aaKnown RBP4.14□□□□□ -1.75
VPS41-212ENST00000482217 COTL1Q14019 142 aa4.14□□□□□ -1.75
VPS41-212ENST00000482217 GNA13Q14344 377 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms