RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 GRID2O43424 1007 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 PPFIA2O75334 1257 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 AGTP01019 485 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 CCDC175P0C221 793 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 ACP5P13686 325 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 PSMB4P28070 264 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 EIF3IQ13347 325 aaKnown RBP11.76□□□□□ -0.53
HMGN1-213ENST00000482192 NR1D2Q14995 579 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 C3orf38Q5JPI3 329 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 IGF2-ASQ6U949 168 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 TTC30BQ8N4P2 665 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 WDR36Q8NI36 951 aaKnown RBP11.76□□□□□ -0.53
HMGN1-213ENST00000482192 CCDC110Q8TBZ0 833 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 FGF11Q92914 225 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 LIN37Q96GY3 246 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-213ENST00000482192 ZNF578Q96N58 590 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-213ENST00000482192 TMEM74Q96NL1 305 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 FICDQ9BVA6 458 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 STRADBQ9C0K7 418 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 OR2AG1Q9H205 316 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 BPIFA1Q9NP55 256 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 IL26Q9NPH9 171 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.76□□□□□ -0.538e-15■■■□□ 14.8
HMGN1-213ENST00000482192 IL17CQ9P0M4 197 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 PCDHGA8Q9Y5G5 932 aa11.76□□□□□ -0.53
HMGN1-213ENST00000482192 PCYT1BQ9Y5K3 369 aaPredicted RBP11.76□□□□□ -0.53
HMGN1-213ENST00000482192 ASPMQ8IZT6 3477 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 COL27A1Q8IZC6 1860 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-213ENST00000482192 GLYATL1P3A0A0U1RQE8 302 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 C5orf60A6NFR6 353 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 CHUKO15111 745 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 RRP8O43159 456 aaKnown RBP11.75□□□□□ -0.53
HMGN1-213ENST00000482192 TLX3O43711 291 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-213ENST00000482192 NRDCO43847 1150 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 VEGFDO43915 354 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 CPNE6O95741 557 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 SLC2A4P14672 509 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ZNF8P17098 575 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-213ENST00000482192 RBMS1P29558 406 aaKnown RBP11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ALDH4A1P30038 563 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 CCKBRP32239 447 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ADRA1AP35348 466 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 SPAM1P38567 509 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 EIF2S3P41091 472 aaKnown RBP11.75□□□□□ -0.53
HMGN1-213ENST00000482192 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-213ENST00000482192 GPR3P46089 330 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 FASLGP48023 281 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 INHBCP55103 352 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ERVPABLB-1P60509 514 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 B4GALNT1Q00973 533 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 CLPPQ16740 277 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-213ENST00000482192 MAP9Q49MG5 647 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ATP13A5Q4VNC0 1218 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ZNF648Q5T619 568 aaPredicted RBP11.75□□□□□ -0.53
HMGN1-213ENST00000482192 SEL1L2Q5TEA6 688 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 RANBP10Q6VN20 620 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ARHGEF18Q6ZSZ5 1173 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 B3GNT8Q7Z7M8 397 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ADGRG6Q86SQ4 1221 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 LRRC8AQ8IWT6 810 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 SFRP1Q8N474 314 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 FAM71DQ8N9W8 422 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 SLC35B2Q8TB61 432 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 PATE1Q8WXA2 126 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ALS2CR12Q96Q35 445 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 FOXP3Q9BZS1 431 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 EPB41L5Q9HCM4 733 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 ARFGAP3Q9NP61 516 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 THSD1Q9NS62 852 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 KCNK6Q9Y257 313 aa11.75□□□□□ -0.53
HMGN1-213ENST00000482192 A0A1W2PNU3 283 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 C2orf81A6NN90 581 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 STX7O15400 261 aaKnown RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 B4GAT1O43505 415 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 CDK14O94921 469 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 F3P13726 295 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 CLCNKAP51800 687 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 PCBP4P57723 403 aaKnown RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 OR1D5P58170 312 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 ITGA9Q13797 1035 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 TAF1AQ15573 450 aaPredicted RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 PARP6Q2NL67 630 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 P3H1Q32P28 736 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 FOXR1Q6PIV2 292 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 CRTC3Q6UUV7 619 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 FAM151BQ6UXP7 276 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 LRRC69Q6ZNQ3 347 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 ZNF662Q6ZS27 426 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 PIM3Q86V86 326 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 LRRTM4Q86VH4 590 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 ZNF248Q8NDW4 579 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 GDAP1Q8TB36 358 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 BRSK1Q8TDC3 778 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 SLC37A2Q8TED4 501 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 HNRNPLLQ8WVV9 542 aaKnown RBP11.74□□□□□ -0.53
HMGN1-213ENST00000482192 TMEM159Q96B96 161 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 SLC46A1Q96NT5 459 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 APOL2Q9BQE5 337 aa11.74□□□□□ -0.53
HMGN1-213ENST00000482192 FRMD8P1Q9BZ68 369 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms