RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 TUBB2BQ9BVA1 445 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 ASB8Q9H765 288 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 TRIM39Q9HCM9 518 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 XAB2Q9HCS7 855 aaKnown RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 SMOXQ9NWM0 555 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 NLGN3Q9NZ94 848 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 BTBD3Q9Y2F9 522 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 TCAF1Q9Y4C2 921 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 OAS3Q9Y6K5 1087 aaKnown RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 SLC30A1Q9Y6M5 507 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 SCN8AQ9UQD0 1980 aa10.73□□□□□ -0.69
ATG4B-219ENST00000479941 ARID1BQ8NFD5 2236 aaPredicted RBP10.73□□□□□ -0.69
ATG4B-219ENST00000479941 TDRD6O60522 2096 aaKnown RBP10.72□□□□□ -0.69
ATG4B-219ENST00000479941 AGAP14A8MT82 685 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 SMAPO00193 183 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 DNALI1O14645 258 aaPredicted RBP10.72□□□□□ -0.69
ATG4B-219ENST00000479941 VEGFDO43915 354 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 UGT1A9O60656 530 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 DNAJC6O75061 913 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 TMEM63AO94886 807 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 FUCA1P04066 466 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 ANXA6P08133 673 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 GIMD1P0DJR0 217 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 UGT1A6P19224 532 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 ITGALP20701 1170 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 UGT1A1P22309 533 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 UGT1A4P22310 534 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 MC4RP32245 332 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 UGT1A3P35503 534 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 UGT1A5P35504 534 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 GNPDA1P46926 289 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 NOVA1P51513 510 aaKnown RBP10.72□□□□□ -0.69
ATG4B-219ENST00000479941 ACVR1Q04771 509 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 TMEM115Q12893 351 aaPredicted RBP10.72□□□□□ -0.69
ATG4B-219ENST00000479941 ILF3Q12906 894 aaKnown RBP eCLIP10.72□□□□□ -0.69
ATG4B-219ENST00000479941 NFATC2Q13469 925 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 C1orf61Q13536 156 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 PEX6Q13608 980 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 LRP8Q14114 963 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 TRIP6Q15654 476 aaKnown RBP10.72□□□□□ -0.69
ATG4B-219ENST00000479941 WHAMMP3Q1A5X7 153 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 GPR33Q49SQ1 333 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 PYCR3Q53H96 274 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 TSTD2Q5T7W7 516 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 ANKRD22Q5VYY1 191 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 KCTD16Q68DU8 428 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 MARK2Q7KZI7 788 aaKnown RBP10.72□□□□□ -0.69
ATG4B-219ENST00000479941 SNX20Q7Z614 316 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 GLRX5Q86SX6 157 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 HOOK3Q86VS8 718 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 GALNT13Q8IUC8 556 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 NAT8LQ8N9F0 302 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 FAM181AQ8N9Y4 354 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 DDHD1Q8NEL9 900 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 KIF18AQ8NI77 898 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 PTCD2Q8WV60 388 aaKnown RBP10.72□□□□□ -0.69
ATG4B-219ENST00000479941 ULK4Q96C45 1275 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 TTC25Q96NG3 672 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 CAMK1GQ96NX5 476 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 SERPINB12Q96P63 405 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 GSDMCQ9BYG8 508 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 ZCCHC2Q9C0B9 1178 aaKnown RBP10.72□□□□□ -0.69
ATG4B-219ENST00000479941 CLPBQ9H078 707 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 TMEM168Q9H0V1 697 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 OR2AG1Q9H205 316 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 CAAP1Q9H8G2 361 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 UGT1A7Q9HAW7 530 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 UGT1A10Q9HAW8 530 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 UGT1A8Q9HAW9 530 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 NCKIPSDQ9NZQ3 722 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 ATXN10Q9UBB4 475 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 FTSJ1Q9UET6 329 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 CRLS1Q9UJA2 301 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 TMPRSS11EQ9UL52 423 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 DOLKQ9UPQ8 538 aa10.72□□□□□ -0.69
ATG4B-219ENST00000479941 MAGEB16A2A368 324 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 FAM187AA6NFU0 413 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 TRIM38O00635 465 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 NDC80O14777 642 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 CHUKO15111 745 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 YY2O15391 372 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 FFAR2O15552 330 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 TTI1O43156 1089 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 GRID2O43424 1007 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 TNFSF14O43557 240 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 SIGLEC6O43699 453 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 CDK14O94921 469 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 LDOC1O95751 146 aaPredicted RBP10.71□□□□□ -0.69
ATG4B-219ENST00000479941 ZNF8P17098 575 aaPredicted RBP10.71□□□□□ -0.69
ATG4B-219ENST00000479941 IVDP26440 423 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 MGAT1P26572 445 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 GOLGA4Q13439 2230 aaKnown RBP10.71□□□□□ -0.69
ATG4B-219ENST00000479941 GTF2H3Q13889 308 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 DEFB133Q30KQ1 61 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 GPRC6AQ5T6X5 926 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 RNASEH2BQ5TBB1 312 aaKnown RBP10.71□□□□□ -0.69
ATG4B-219ENST00000479941 PSAPL1Q6NUJ1 521 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 ZCCHC8Q6NZY4 707 aaKnown RBP10.71□□□□□ -0.69
ATG4B-219ENST00000479941 DGLUCYQ7Z3D6 616 aa10.71□□□□□ -0.69
ATG4B-219ENST00000479941 TAF8Q7Z7C8 310 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms