RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 PELI3Q8N2H9 469 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 TMEM40Q8WWA1 233 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 TRIB2Q92519 343 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 HDAC11Q96DB2 347 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 C3orf30Q96M34 536 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 ZNF560Q96MR9 790 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 EMILIN2Q9BXX0 1053 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 WDR12Q9GZL7 423 aaKnown RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 NANOGQ9H9S0 305 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 POLR1BQ9H9Y6 1135 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 DUS2Q9NX74 493 aaKnown RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 DNAJC25-GNG10A0A024R161 153 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 TTC24A2A3L6 582 aaPredicted RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 NCAM2O15394 837 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 ACSL4O60488 711 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 IPO13O94829 963 aaKnown RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 COL6A1P12109 1028 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 SLC7A1P30825 629 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 CASP2P42575 452 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 RAD23AP54725 363 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 RACK1P63244 317 aaKnown RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 GALK2Q01415 458 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 NOL9Q5SY16 702 aaKnown RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 FAM205BPQ63HN1 556 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 SLC22A16Q86VW1 577 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 ARRDC4Q8NCT1 418 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 TTC16Q8NEE8 873 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 C7orf57Q8NEG2 295 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 PPHLN1Q8NEY8 458 aaKnown RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 OR6P1Q8NGX9 317 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 ANKRD49Q8WVL7 239 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 SH3YL1Q96HL8 342 aaPredicted RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 FBXL20Q96IG2 436 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 SMOXQ9NWM0 555 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 TMEM9Q9P0T7 183 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 CNOT11Q9UKZ1 510 aaKnown RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 CAB39Q9Y376 341 aaPredicted RBP11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 UGT2A1Q9Y4X1 527 aa11.01□□□□□ -0.65
LRRFIP1-211ENST00000478958 LRRC14BA6NHZ5 514 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 TRIM24O15164 1050 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 KCNH1O95259 989 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 NADKO95544 446 aaPredicted RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 MOCS2O96007 188 aaPredicted RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SLC9A3P48764 834 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 RPL34P49207 117 aaKnown RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 MLLT6P55198 1093 aaPredicted RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 DAOAP59103 153 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 ITKQ08881 620 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SQLEQ14534 574 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 PAN2Q504Q3 1202 aaKnown RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 MAMDC4Q6UXC1 1216 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 RETREG3Q86VR2 466 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 ATPAF2Q8N5M1 289 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 PAF1Q8N7H5 531 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 BEND7Q8N7W2 519 aaPredicted RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 OR52K2Q8NGK3 314 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SH3RF2Q8TEC5 729 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SGCDQ92629 289 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 METTL2AQ96IZ6 378 aaKnown RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 DNAI2Q9GZS0 605 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 NSMCE4AQ9NXX6 385 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 CRYL1Q9Y2S2 319 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 MEIS3P2A8K0S8 358 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 FAM25EA8MYX2 175 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 UBFD1O14562 309 aaKnown RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 CD4P01730 458 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 ARCN1P48444 511 aaKnown RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 KCNC1P48547 511 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 PRKAA2P54646 552 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 MLLT10P55197 1068 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 MAXP61244 160 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SEMA3BQ13214 749 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 PLCL1Q15111 1095 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 NHSL2Q5HYW2 709 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SAMD4BQ5PRF9 694 aaKnown RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 GPR158Q5T848 1215 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 TAPT1Q6NXT6 567 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 CYP20A1Q6UW02 462 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 PIM3Q86V86 326 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 LURAP1LQ8IV03 231 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 DDIASQ8IXT1 998 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SHCBP1Q8NEM2 672 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 DNAJB3Q8WWF6 145 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SLC2A13Q96QE2 648 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SMOQ99835 787 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 SLC25A23Q9BV35 468 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 MKRN2Q9H000 416 aaKnown RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 FAM124BQ9H5Z6 455 aaPredicted RBP11□□□□□ -0.65
LRRFIP1-211ENST00000478958 CRTAC1Q9NQ79 661 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 POLE4Q9NR33 117 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 MAU2Q9Y6X3 613 aa11□□□□□ -0.65
LRRFIP1-211ENST00000478958 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.99□□□□□ -0.65
LRRFIP1-211ENST00000478958 OR51F1A6NGY5 319 aa10.99□□□□□ -0.65
LRRFIP1-211ENST00000478958 EVPLLA8MZ36 301 aa10.99□□□□□ -0.65
LRRFIP1-211ENST00000478958 NPHS1O60500 1241 aa10.99□□□□□ -0.65
LRRFIP1-211ENST00000478958 SIX3O95343 332 aaPredicted RBP10.99□□□□□ -0.65
LRRFIP1-211ENST00000478958 MTHFD1P11586 935 aaKnown RBP10.99□□□□□ -0.65
LRRFIP1-211ENST00000478958 OXTRP30559 389 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms