RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 UGT1A8Q9HAW9 530 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 ARNT2Q9HBZ2 717 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 NLGN3Q9NZ94 848 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 NFKBIL1Q9UBC1 381 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-215ENST00000478531 ASIC3Q9UHC3 531 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 ZNHIT2Q9UHR6 403 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 CNOT6Q9ULM6 557 aaKnown RBP6.84□□□□□ -1.32
BRCA1-215ENST00000478531 SLC17A4Q9Y2C5 497 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 GPSM3Q9Y4H4 160 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 DGKBQ9Y6T7 804 aa6.84□□□□□ -1.32
BRCA1-215ENST00000478531 PTPRBP23467 1997 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 TPRP12270 2363 aaKnown RBP6.83□□□□□ -1.32
BRCA1-215ENST00000478531 TCRBV7S3A2A0A539 114 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 B4DGG1 531 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 LMO7DNF2Z398 122 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 GOLGA8MH3BSY2 632 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 GAPDHSO14556 408 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-215ENST00000478531 LDB2O43679 373 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 PPFIA2O75334 1257 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 FUCA1P04066 466 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 FTH1P19P0C7X4 201 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 AK4P27144 223 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-215ENST00000478531 AKT1P31749 480 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 ADCY8P40145 1251 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 ILF3Q12906 894 aaKnown RBP eCLIP6.83□□□□□ -1.32
BRCA1-215ENST00000478531 MSLNQ13421 630 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-215ENST00000478531 ITGA9Q13797 1035 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 ANKRD22Q5VYY1 191 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 PDPK2PQ6A1A2 396 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 SLC30A9Q6PML9 568 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 NLRP8Q86W28 1048 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 GKN2Q86XP6 184 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 PPHLN1Q8NEY8 458 aaKnown RBP6.83□□□□□ -1.32
BRCA1-215ENST00000478531 OR2M4Q96R27 311 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 DUSP23Q9BVJ7 150 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 FAM96AQ9H5X1 160 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 CASS4Q9NQ75 786 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 EIF2B3Q9NR50 452 aaKnown RBP6.83□□□□□ -1.32
BRCA1-215ENST00000478531 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.83□□□□□ -1.32
BRCA1-215ENST00000478531 ATXN10Q9UBB4 475 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 PLEKHM1Q9Y4G2 1056 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 PCYT1BQ9Y5K3 369 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-215ENST00000478531 DMXL2Q8TDJ6 3036 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 ACACBO00763 2458 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 ZZEF1O43149 2961 aa6.83□□□□□ -1.32
BRCA1-215ENST00000478531 ANKRD11Q6UB99 2663 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ZFHX4Q86UP3 3567 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 HEATR9A2RTY3 570 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 YY2O15391 372 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TNFSF14O43557 240 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 AVILO75366 819 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 SRP72O76094 671 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TMEM63AO94886 807 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 IVLP07476 585 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 GIMD1P0DJR0 217 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ACP5P13686 325 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ZNF8P17098 575 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TPSB2P20231 275 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 MC4RP32245 332 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 CA5AP35218 305 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 HADHAP40939 763 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ACTR1BP42025 376 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ACTR1AP61163 376 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 CTBSQ01459 385 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 DR1Q01658 176 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 C2orf54Q08AI8 447 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 NFATC2Q13469 925 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 KCNJ11Q14654 390 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TPSAB1Q15661 275 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 SMAD1Q15797 465 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 KHDC1Q4VXA5 237 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ZRANB3Q5FWF4 1079 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 N4BP2L1Q5TBK1 243 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ZCCHC8Q6NZY4 707 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 DET1Q7L5Y6 550 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 CHST15Q7LFX5 561 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TRAPPC5Q8IUR0 188 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 KYQ8NBH2 561 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 FAM46DQ8NEK8 389 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 NAT14Q8WUY8 206 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 SCG3Q8WXD2 468 aaKnown RBP6.82□□□□□ -1.32
BRCA1-215ENST00000478531 CPT1BQ92523 772 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 APOLD1Q96LR9 279 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TTC25Q96NG3 672 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 KRT12Q99456 494 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TRIM51Q9BSJ1 452 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 GSDMCQ9BYG8 508 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 DPEP2Q9H4A9 486 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 ASB8Q9H765 288 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 VPS18Q9P253 973 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 GULP1Q9UBP9 304 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 SLC2A6Q9UGQ3 507 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 CRLS1Q9UJA2 301 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 APPL1Q9UKG1 709 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 TMPRSS11EQ9UL52 423 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 GPR34Q9UPC5 381 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 CSNK1G3Q9Y6M4 447 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 SLC30A1Q9Y6M5 507 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 UNC13CQ8NB66 2214 aa6.82□□□□□ -1.32
BRCA1-215ENST00000478531 KNTC1P50748 2209 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms