RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 CDK20Q8IZL9 346 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 DSELQ8IZU8 1212 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 NACC2Q96BF6 587 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 EPS8L2Q9H6S3 715 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 AASDHPPTQ9NRN7 309 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 MYH3P11055 1940 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 CACNB4O00305 520 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 SNAP91O60641 907 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 FAM20BO75063 409 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 KLF1Q13351 362 aaPredicted RBP14.13□□□□□ -0.15
NPHP4-208ENST00000478423 TMPRSS11BQ86T26 416 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 ZNF461Q8TAF7 563 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 TMEM40Q8WWA1 233 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 ARHGAP39Q9C0H5 1083 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 DNAJB4Q9UDY4 337 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 CYTH4Q9UIA0 394 aa14.13□□□□□ -0.15
NPHP4-208ENST00000478423 DNAJC25-GNG10A0A024R161 153 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 ILVBLA1L0T0 632 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 MTMR11A4FU01 709 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 GABRDO14764 452 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 KRT20P35900 424 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 CAP1Q01518 475 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 TNK2Q07912 1038 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 GALNT2Q10471 571 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 RALGDSQ12967 914 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 RFTN1Q14699 578 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 TAF1AQ15573 450 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 CCDC142Q17RM4 750 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 IL23RQ5VWK5 629 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 CASP12Q6UXS9 341 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 ARHGAP36Q6ZRI8 547 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 IFNLR1Q8IU57 520 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 AADATQ8N5Z0 425 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 TMCO5AQ8N6Q1 288 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 SKA1Q96BD8 255 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 CDKN2AIPNLQ96HQ2 116 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 FAIM2Q9BWQ8 316 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 ARMC7Q9H6L4 198 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 LRTM1Q9HBL6 345 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 PNPLA8Q9NP80 782 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 PHPT1Q9NRX4 125 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 DNAJC28Q9NX36 388 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 PKD1L3Q7Z443 1732 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 A0A087WXM4 84 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 ENPP3O14638 875 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 ZNF623O75123 536 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 RNASEH2AO75792 299 aaKnown RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 CLTBP09497 229 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 NCF4Q15080 339 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 VPS26BQ4G0F5 336 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 AAGABQ6PD74 315 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 PSRC1Q6PGN9 363 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 C17orf64Q86WR6 236 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 CLVS1Q8IUQ0 354 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 C2orf73Q8N5S3 287 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 DCUN1D5Q9BTE7 237 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 TMEM245Q9H330 911 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 KLHL20Q9Y2M5 609 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 FAM159BA6NKW6 160 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 APODP05090 189 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 CHRNGP07510 517 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 CNPP09543 421 aaKnown RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 TLX1P31314 330 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 RPL3P39023 403 aaKnown RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 CAPZA2P47755 286 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 DGKGP49619 791 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 NEK2P51955 445 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 C1DQ13901 141 aaKnown RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 TTC23Q5W5X9 447 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 SMG8Q8ND04 991 aaKnown RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 RORBQ92753 470 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 SIGLEC10Q96LC7 697 aa14.12□□□□□ -0.15
NPHP4-208ENST00000478423 POLR3BQ9NW08 1133 aaPredicted RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 EIF2B4Q9UI10 523 aaKnown RBP14.12□□□□□ -0.15
NPHP4-208ENST00000478423 MEIS3P2A8K0S8 358 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 BEST1O76090 585 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 CNTN5O94779 1100 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 OR4F21O95013 312 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 DEFA1P59665 94 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 DEFA3P59666 94 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 IRF9Q00978 393 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 UPP1Q16831 310 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 PQLC1Q8N2U9 271 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 BEND7Q8N7W2 519 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-208ENST00000478423 SIDT2Q8NBJ9 832 aaKnown RBP14.11□□□□□ -0.15
NPHP4-208ENST00000478423 OR2T12Q8NG77 320 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 USP7Q93009 1102 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 FERD3LQ96RJ6 166 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 HOPXQ9BPY8 73 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-208ENST00000478423 EBF4Q9BQW3 602 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 PAAF1Q9BRP4 392 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 OSBPL6Q9BZF3 934 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 DENND2DQ9H6A0 471 aaPredicted RBP14.11□□□□□ -0.15
NPHP4-208ENST00000478423 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 RPS6KA6Q9UK32 745 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 ABHD14A-ACY1A0A1B0GW23 586 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 CAPN1P07384 714 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 RXRGP48443 463 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 PSMD8P48556 350 aa14.11□□□□□ -0.15
NPHP4-208ENST00000478423 GATMP50440 423 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms