RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 LRRC4Q9HBW1 653 aa3.28□□□□□ -1.88
TARDBP-208ENST00000477447 EPB41L5Q9HCM4 733 aa3.28□□□□□ -1.88
TARDBP-208ENST00000477447 MTMR10Q9NXD2 777 aa3.28□□□□□ -1.88
TARDBP-208ENST00000477447 MAP3K20Q9NYL2 800 aaKnown RBP3.28□□□□□ -1.88
TARDBP-208ENST00000477447 ZNF580Q9UK33 172 aa3.28□□□□□ -1.88
TARDBP-208ENST00000477447 GPR34Q9UPC5 381 aa3.28□□□□□ -1.88
TARDBP-208ENST00000477447 PTPRCP08575 1304 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 PDS5AQ29RF7 1337 aaKnown RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 IGHV4OR15-8A0A075B7B6 117 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 DENND3A2RUS2 1198 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 AGAP14A8MT82 685 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 SMTNL1A8MU46 457 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 ZNF587BE7ETH6 402 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 ANKRD28O15084 1053 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 SLC16A5O15375 505 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 GJB3O75712 270 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 GFPT2O94808 682 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 HIST1H2ABP04908 130 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 ACTN1P12814 892 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 MYOD1P15172 320 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 ITGA2P17301 1181 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 ALOX12P18054 663 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 HIST1H2ADP20671 130 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 PON1P27169 355 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 ACADLP28330 430 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 APOBEC1P41238 236 aaKnown RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 MSH2P43246 934 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 GPR143P51810 404 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 CLDN20P56880 219 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 ISL1P61371 349 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 CHAF1BQ13112 559 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 WTAPQ15007 396 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 MYLK3Q32MK0 819 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 DUSP28Q4G0W2 176 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 NSUN5P2Q63ZY6 315 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 PMS2CLQ68D20 193 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 PAPD4Q6PIY7 484 aaKnown RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 SPSB3Q6PJ21 355 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 UNQ6126/PRO20091Q6UXV3 157 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 HIST3H2AQ7L7L0 130 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 TSPAN33Q86UF1 283 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 SATL1Q86VE3 508 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 TMEM219Q86XT9 240 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 RPAP2Q8IXW5 612 aaPredicted RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 HACE1Q8IYU2 909 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 RNF113BQ8IZP6 322 aaKnown RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 C1orf87Q8N0U7 546 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 C1orf131Q8NDD1 294 aaKnown RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 OR5R1Q8NH85 324 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 BBS10Q8TAM1 723 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 SLC44A1Q8WWI5 657 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 ABTB1Q969K4 478 aaPredicted RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 PIGTQ969N2 578 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 MOAP1Q96BY2 351 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 DUX5Q96PT3 197 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 NUDCD1Q96RS6 583 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 CSTL1Q9H114 145 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 RETREG1Q9H6L5 497 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 MAGIXQ9H6Y5 334 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 DDX31Q9H8H2 851 aaKnown RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 UBA2Q9UBT2 640 aaPredicted RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 FBXO2Q9UK22 296 aaPredicted RBP3.27□□□□□ -1.89
TARDBP-208ENST00000477447 NENFQ9UMX5 172 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 PROCRQ9UNN8 238 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 CMAHPQ9Y471 501 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 PCDHAC2Q9Y5I4 1007 aa3.27□□□□□ -1.89
TARDBP-208ENST00000477447 CDRT15L2A8MXV6 281 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 B4DLN1 442 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 FAM90A26D6RGX4 464 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 PLPP2O43688 288 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 SNRNP70P08621 437 aaKnown RBP3.26□□□□□ -1.89
TARDBP-208ENST00000477447 HLA-DOBP13765 273 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 ITGB6P18564 788 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 POLR2CP19387 275 aaPredicted RBP3.26□□□□□ -1.89
TARDBP-208ENST00000477447 GCH1P30793 250 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 USP8P40818 1118 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 MRPL12P52815 198 aaKnown RBP3.26□□□□□ -1.89
TARDBP-208ENST00000477447 GAS1P54826 345 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 MFAP4P55083 255 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 COG7P83436 770 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 AIMP2Q13155 320 aaKnown RBP3.26□□□□□ -1.89
TARDBP-208ENST00000477447 PRKG2Q13237 762 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 CUL4AQ13619 759 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 IRF3Q14653 427 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 RILPL1Q5EBL4 403 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 IRAK1BP1Q5VVH5 260 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 SPATA1Q5VX52 437 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 C18orf63Q68DL7 685 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 GFRALQ6UXV0 394 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 MAP7D3Q8IWC1 876 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 RBMXL3Q8N7X1 1067 aaKnown RBP3.26□□□□□ -1.89
TARDBP-208ENST00000477447 SPATA20Q8TB22 786 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 THAP6Q8TBB0 222 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 UTP15Q8TED0 518 aaKnown RBP3.26□□□□□ -1.89
TARDBP-208ENST00000477447 TRPC4APQ8TEL6 797 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 DNAAF4Q8WXU2 420 aa3.26□□□□□ -1.89
TARDBP-208ENST00000477447 NSUN4Q96CB9 384 aaKnown RBP3.26□□□□□ -1.89
TARDBP-208ENST00000477447 SAT2Q96F10 170 aaPredicted RBP3.26□□□□□ -1.89
TARDBP-208ENST00000477447 CDCA5Q96FF9 252 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms