RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 C2orf78A6NCI8 922 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 MATN4O95460 622 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 ALDOCP09972 364 aaKnown RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 LBPP18428 481 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 RGRP47804 291 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 CLCN4P51793 760 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 CYTH1Q15438 398 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TAF12Q16514 161 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 KIF19Q2TAC6 998 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 ADGRF1Q5T601 910 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 ZNF783Q6ZMS7 281 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 DNAJB7Q7Z6W7 309 aaPredicted RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TMEM150AQ86TG1 271 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 FUNDC1Q8IVP5 155 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TCEAL8Q8IYN2 117 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 LILRA2Q8N149 483 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 MIER2Q8N344 545 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TMEM102Q8N9M5 508 aaPredicted RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 CLP1Q92989 425 aaKnown RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 PRICKLE1Q96MT3 831 aaPredicted RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 EFHD1Q9BUP0 239 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 ZNF334Q9HCZ1 680 aaPredicted RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 PFDN4Q9NQP4 134 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 INSL6Q9Y581 213 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 ACTL7AQ9Y615 435 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 COMMD10Q9Y6G5 202 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 A0A0J9YYE9 177 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 SUPT3HB4E1H0 165 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 PIP5K1BO14986 540 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TGM5O43548 720 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 KLK8O60259 260 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 DNAJA2O60884 412 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 VPS26AO75436 327 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 SUPT3HO75486 399 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 STC2O76061 302 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 PEX19P40855 299 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 CCNHP51946 323 aaPredicted RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 GRIK2Q13002 908 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 MAP7D1Q3KQU3 841 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 LIN52Q52LA3 116 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 SETMARQ53H47 684 aaPredicted RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 COQ5Q5HYK3 327 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 FOXB2Q5VYV0 432 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 SPRED2Q7Z698 418 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 HERC6Q8IVU3 1022 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 FAM156AQ8NDB6 213 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TRPC4APQ8TEL6 797 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TSPEARQ8WU66 669 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TRMT2BQ96GJ1 504 aaKnown RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 NUSAP1Q9BXS6 441 aaKnown RBP16.34■□□□□ 0.21
TMEM53-208ENST00000476724 GKN1Q9NS71 199 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TRPM5Q9NZQ8 1165 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 FAM50BQ9Y247 325 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 MED16Q9Y2X0 877 aa16.34■□□□□ 0.21
TMEM53-208ENST00000476724 TCRBV3S1A0A5B6 114 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 PRORSD1PA6NEY8 169 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 ANKRD66B4E2M5 251 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 F11P03951 625 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 PKMP14618 531 aaKnown RBP16.33■□□□□ 0.21
TMEM53-208ENST00000476724 EEF1DP29692 281 aaKnown RBP16.33■□□□□ 0.21
TMEM53-208ENST00000476724 CORO1AP31146 461 aaKnown RBP16.33■□□□□ 0.21
TMEM53-208ENST00000476724 TLR1Q15399 786 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 SPATS1Q496A3 300 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 PABPC1LQ4VXU2 614 aaKnown RBP16.33■□□□□ 0.21
TMEM53-208ENST00000476724 FBXL19Q6PCT2 694 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 PHYKPLQ8IUZ5 450 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 WBP2Q969T9 261 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 PBXIP1Q96AQ6 731 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 NSMCE3Q96MG7 304 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 FBRSL1Q9HCM7 1045 aaKnown RBP16.33■□□□□ 0.21
TMEM53-208ENST00000476724 NDUFA13Q9P0J0 144 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 RAI2Q9Y5P3 530 aa16.33■□□□□ 0.21
TMEM53-208ENST00000476724 BPTFQ12830 3046 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 CARNS1A5YM72 827 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 H7C0S8 307 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 CBX4O00257 560 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 MLYCDO95822 493 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 KLKB1P03952 638 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 RPS17P08708 135 aaKnown RBP16.33■□□□□ 0.2
TMEM53-208ENST00000476724 IDO1P14902 403 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 ARSAP15289 507 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 HDCP19113 662 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 SLC7A1P30825 629 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 MRPL19P49406 292 aaKnown RBP16.33■□□□□ 0.2
TMEM53-208ENST00000476724 ADARP55265 1226 aaKnown RBP16.33■□□□□ 0.2
TMEM53-208ENST00000476724 ERVFC1P60507 584 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 VEPH1Q14D04 833 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 PTPRNQ16849 979 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 AARS2Q5JTZ9 985 aaKnown RBP16.33■□□□□ 0.2
TMEM53-208ENST00000476724 OGFOD2Q6N063 350 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 SPATA19Q7Z5L4 167 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 DDIASQ8IXT1 998 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 LPCAT1Q8NF37 534 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 OR9I1Q8NGQ6 314 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.33■□□□□ 0.2
TMEM53-208ENST00000476724 BIRC8Q96P09 236 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 GPR21Q99679 349 aa16.33■□□□□ 0.2
TMEM53-208ENST00000476724 SDR39U1Q9NRG7 319 aaPredicted RBP16.33■□□□□ 0.2
TMEM53-208ENST00000476724 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.33■□□□□ 0.2
TMEM53-208ENST00000476724 AP4B1Q9Y6B7 739 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms