RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TMEM184BQ9Y519 407 aaPredicted RBP5.92□□□□□ -1.46
VPS50-212ENST00000476413 TAF1P21675 1872 aa5.92□□□□□ -1.46
VPS50-212ENST00000476413 A0A1W2PRQ8 180 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 SOCS6O14544 535 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 CH25HO95992 272 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 APOA4P06727 396 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 TPOP07202 933 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 ABCB1P08183 1280 aaPredicted RBP5.91□□□□□ -1.46
VPS50-212ENST00000476413 UGT1A1P22309 533 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 NR4A2P43354 598 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 RAD23AP54725 363 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 POU5F1Q01860 360 aaKnown RBP5.91□□□□□ -1.46
VPS50-212ENST00000476413 SNTB1Q13884 538 aaKnown RBP5.91□□□□□ -1.46
VPS50-212ENST00000476413 IL11RAQ14626 422 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 AMZ1Q400G9 498 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 CCDC184Q52MB2 194 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 ZNF628Q5EBL2 1059 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 C1orf141Q5JVX7 400 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 DCST1Q5T197 706 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 TYW3Q6IPR3 259 aaKnown RBP5.91□□□□□ -1.46
VPS50-212ENST00000476413 KCTD18Q6PI47 426 aaPredicted RBP5.91□□□□□ -1.46
VPS50-212ENST00000476413 C1QL2Q7Z5L3 287 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 TECPR1Q7Z6L1 1165 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 PIM3Q86V86 326 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 HMGCLL1Q8TB92 370 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 WFIKKN2Q8TEU8 576 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 TAAR8Q969N4 342 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 MOAP1Q96BY2 351 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 TXNDC15Q96J42 360 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 ZNF778Q96MU6 729 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 CAMK1GQ96NX5 476 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 CDRT15Q96T59 188 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 RBM38Q9H0Z9 239 aaKnown RBP5.91□□□□□ -1.46
VPS50-212ENST00000476413 SLCO5A1Q9H2Y9 848 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 RABEP2Q9H5N1 569 aa5.91□□□□□ -1.46
VPS50-212ENST00000476413 OR6C75A6NL08 312 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 A6NL46 340 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 EIF4E1BA6NMX2 242 aaKnown RBP5.9□□□□□ -1.46
VPS50-212ENST00000476413 MAGEB17A8MXT2 336 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 FAM90A26D6RGX4 464 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 SPINT2O43291 252 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 CREG1O75629 220 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 C22orf31O95567 290 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 CAPZA2P47755 286 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 BRWD1-AS2P59051 145 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 BNC1Q01954 994 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 TRAF3Q13114 568 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 SETMARQ53H47 684 aaPredicted RBP5.9□□□□□ -1.46
VPS50-212ENST00000476413 PAPD4Q6PIY7 484 aaKnown RBP5.9□□□□□ -1.46
VPS50-212ENST00000476413 PELI3Q8N2H9 469 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 SLC38A9Q8NBW4 561 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 Q8NFD4 153 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 LPGAT1Q92604 370 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 KXD1Q9BQD3 176 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 RTN4RQ9BZR6 473 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 DCLK3Q9C098 648 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 SPATC1LQ9H0A9 340 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 SH3GLB2Q9NR46 395 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 C1RLQ9NZP8 487 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 TSPYL4Q9UJ04 414 aa5.9□□□□□ -1.46
VPS50-212ENST00000476413 ZHX1Q9UKY1 873 aaPredicted RBP5.9□□□□□ -1.46
VPS50-212ENST00000476413 PPIEQ9UNP9 301 aaKnown RBP5.9□□□□□ -1.46
VPS50-212ENST00000476413 TSPY2A6NKD2 308 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 PPFIA2O75334 1257 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 GH2P01242 217 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 TSPY3P0CV98 308 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 TSPY8P0CW00 308 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 HRH2P25021 359 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 HOXD3P31249 432 aaPredicted RBP5.89□□□□□ -1.47
VPS50-212ENST00000476413 ARRB2P32121 409 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 TAS2R38P59533 333 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 SEC61BP60468 96 aaKnown RBP5.89□□□□□ -1.47
VPS50-212ENST00000476413 PPP2R2BQ00005 443 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 TSPY1Q01534 308 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 ROR1Q01973 937 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 FOXM1Q08050 763 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 MAD2L1Q13257 205 aaPredicted RBP5.89□□□□□ -1.47
VPS50-212ENST00000476413 MVPQ14764 893 aaKnown RBP5.89□□□□□ -1.47
VPS50-212ENST00000476413 SYT16Q17RD7 645 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 CRY2Q49AN0 593 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 C18orf63Q68DL7 685 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 DPY19L2P1Q6NXN4 242 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 LDB1Q86U70 411 aaPredicted RBP5.89□□□□□ -1.47
VPS50-212ENST00000476413 CCDC190Q86UF4 302 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 CEP57Q86XR8 500 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 ACVR1CQ8NER5 493 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 ASB5Q8WWX0 329 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 PCYT2Q99447 389 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 DDOQ99489 341 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 SLC25A33Q9BSK2 321 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 MMTAG2Q9BU76 263 aaKnown RBP5.89□□□□□ -1.47
VPS50-212ENST00000476413 CCDC106Q9BWC9 280 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 C1QTNF7Q9BXJ2 289 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 KCNK15Q9H427 330 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 ST6GALNAC4Q9H4F1 302 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 LARSQ9P2J5 1176 aaKnown RBP5.89□□□□□ -1.47
VPS50-212ENST00000476413 HACL1Q9UJ83 578 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 CCL27Q9Y4X3 112 aa5.89□□□□□ -1.47
VPS50-212ENST00000476413 A0A0U1RQJ8 604 aa5.88□□□□□ -1.47
VPS50-212ENST00000476413 TCRBV21S2A2A0A5A6 115 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms