RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 SCARF2Q96GP6 870 aaPredicted RBP16.08■□□□□ 0.16
COL1A1-205ENST00000476387 SRPK1Q96SB4 655 aaKnown RBP16.08■□□□□ 0.16
COL1A1-205ENST00000476387 HERPUD2Q9BSE4 406 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 GPR63Q9BZJ6 419 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 FOXP3Q9BZS1 431 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 CPNE5Q9HCH3 593 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 MAGEE1Q9HCI5 957 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 RAD18Q9NS91 495 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 ACSL6Q9UKU0 697 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 SUFUQ9UMX1 484 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 SHOC2Q9UQ13 582 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 ZNF711Q9Y462 761 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 ADGRG1Q9Y653 693 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 CAPN6Q9Y6Q1 641 aa16.08■□□□□ 0.16
COL1A1-205ENST00000476387 INPP4BO15327 924 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 ZW10O43264 779 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 ZNF189O75820 626 aaPredicted RBP16.07■□□□□ 0.16
COL1A1-205ENST00000476387 FUCA1P04066 466 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 RBP3P10745 1247 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 RBL1P28749 1068 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 WNT3AP56704 352 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 CLPPQ16740 277 aaPredicted RBP16.07■□□□□ 0.16
COL1A1-205ENST00000476387 HENMT1Q5T8I9 393 aaKnown RBP16.07■□□□□ 0.16
COL1A1-205ENST00000476387 ARHGAP40Q5TG30 622 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 AADACL2Q6P093 401 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 DARS2Q6PI48 645 aaKnown RBP16.07■□□□□ 0.16
COL1A1-205ENST00000476387 TRIM74Q86UV6 250 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 SFTPA2Q8IWL1 248 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 IPMKQ8NFU5 416 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 ZDHHC1Q8WTX9 485 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 FCRL5Q96RD9 977 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 FSD1LQ9BXM9 530 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 CDH19Q9H159 772 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 FAM83DQ9H4H8 585 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 SPATS2LQ9NUQ6 558 aaKnown RBP16.07■□□□□ 0.16
COL1A1-205ENST00000476387 TAAR2Q9P1P5 351 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 GUCA1BQ9UMX6 200 aa16.07■□□□□ 0.16
COL1A1-205ENST00000476387 K7ENP7 123 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 NVLO15381 856 aaKnown RBP16.06■□□□□ 0.16
COL1A1-205ENST00000476387 ASMTLO95671 621 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 FGF1P05230 155 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 SLC5A2P31639 672 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 POLD2P49005 469 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 B4GALNT1Q00973 533 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 CLN3Q13286 438 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 MPP3Q13368 585 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 NR1D2Q14995 579 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 ALS2CLQ60I27 953 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 INO80CQ6PI98 192 aaPredicted RBP16.06■□□□□ 0.16
COL1A1-205ENST00000476387 PCSK4Q6UW60 755 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 KDELC1Q6UW63 502 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 SLITRK4Q8IW52 837 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 TTC13Q8NBP0 860 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 AGAP2Q99490 1192 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 FAM118BQ9BPY3 351 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 GBA3Q9H227 469 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 C10orf88Q9H8K7 445 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.06■□□□□ 0.16
COL1A1-205ENST00000476387 LOXL2Q9Y4K0 774 aa16.06■□□□□ 0.16
COL1A1-205ENST00000476387 RHPN2P1A8MT19 583 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 DDX3YO15523 660 aaKnown RBP16.05■□□□□ 0.16
COL1A1-205ENST00000476387 KCNN4O15554 427 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 C1QL1O75973 258 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 ANXA9O76027 345 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 PRB1P04280 392 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 JMJD7P0C870 316 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 HLA-DPA1P20036 260 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 ADCY8P40145 1251 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 GPR3P46089 330 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 GEMP55040 296 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 MAZP56270 477 aaKnown RBP16.05■□□□□ 0.16
COL1A1-205ENST00000476387 DCDC1P59894 354 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 CTBSQ01459 385 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 ZNF569Q5MCW4 686 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 MARK2Q7KZI7 788 aaKnown RBP16.05■□□□□ 0.16
COL1A1-205ENST00000476387 GALNT13Q8IUC8 556 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 SLC25A41Q8N5S1 370 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 OXNAD1Q96HP4 312 aaPredicted RBP16.05■□□□□ 0.16
COL1A1-205ENST00000476387 HES6Q96HZ4 224 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 COX14Q96I36 57 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 MRGPRX2Q96LB1 330 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 OR2M4Q96R27 311 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 CMKLR1Q99788 373 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 ZSCAN5AQ9BUG6 496 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 SPATA16Q9BXB7 569 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 TRABDQ9H4I3 376 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 HACD3Q9P035 362 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 ATXN7L1Q9ULK2 861 aaPredicted RBP16.05■□□□□ 0.16
COL1A1-205ENST00000476387 TMEM98Q9Y2Y6 226 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 ZNF106Q9H2Y7 1883 aaKnown RBP16.05■□□□□ 0.16
COL1A1-205ENST00000476387 COL6A6A6NMZ7 2263 aa16.05■□□□□ 0.16
COL1A1-205ENST00000476387 ZNF462Q96JM2 2506 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 LOC285095A0A1B0GVY8 99 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 ECEL1O95672 775 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 CPNE6O95741 557 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 EPOP01588 193 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 CCDC175P0C221 793 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 HGFP14210 728 aa16.04■□□□□ 0.16
COL1A1-205ENST00000476387 AK4P27144 223 aaPredicted RBP16.04■□□□□ 0.16
COL1A1-205ENST00000476387 LRP8Q14114 963 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms