RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 GABREP78334 506 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 LRP8Q14114 963 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 PDPK2PQ6A1A2 396 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 SPRED1Q7Z699 444 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 B3GNT8Q7Z7M8 397 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 LRRC8AQ8IWT6 810 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 GLYATL1Q969I3 302 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 PLEKHG4BQ96PX9 1271 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 GFM1Q96RP9 751 aaKnown RBP20.95■□□□□ 0.94
LIME1-204ENST00000476183 APOL2Q9BQE5 337 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 OR2AG1Q9H205 316 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 CARD9Q9H257 536 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 IL17CQ9P0M4 197 aa20.95■□□□□ 0.94
LIME1-204ENST00000476183 BPTFQ12830 3046 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 PMS2P1A4D2B8 440 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 D6RAR5 112 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 BUD23O43709 281 aaKnown RBP20.94■□□□□ 0.94
LIME1-204ENST00000476183 STK10O94804 968 aaKnown RBP20.94■□□□□ 0.94
LIME1-204ENST00000476183 PTMAP06454 111 aaKnown RBP20.94■□□□□ 0.94
LIME1-204ENST00000476183 LSSP48449 732 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 CCZ1BP86790 482 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 CCZ1P86791 482 aaPredicted RBP20.94■□□□□ 0.94
LIME1-204ENST00000476183 B4GALNT1Q00973 533 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 ATP13A5Q4VNC0 1218 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 KHDC1Q4VXA5 237 aaKnown RBP20.94■□□□□ 0.94
LIME1-204ENST00000476183 RANBP10Q6VN20 620 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 CHST15Q7LFX5 561 aaPredicted RBP20.94■□□□□ 0.94
LIME1-204ENST00000476183 GLT6D1Q7Z4J2 308 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 ZNF438Q7Z4V0 828 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 ADGRG6Q86SQ4 1221 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 FAM71DQ8N9W8 422 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 TTC13Q8NBP0 860 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 SLC35B2Q8TB61 432 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 RMI1Q9H9A7 625 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 POLR1BQ9H9Y6 1135 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 TRIM39Q9HCM9 518 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 IL26Q9NPH9 171 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 HACD3Q9P035 362 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 ATXN7L1Q9ULK2 861 aaPredicted RBP20.94■□□□□ 0.94
LIME1-204ENST00000476183 SATB2Q9UPW6 733 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 KCNK6Q9Y257 313 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 FAM208BQ5VWN6 2430 aa20.94■□□□□ 0.94
LIME1-204ENST00000476183 NBEAQ8NFP9 2946 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 C5orf60A6NFR6 353 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 GRID2O43424 1007 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 B4GAT1O43505 415 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 MTX2O75431 263 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 ACP5P13686 325 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 CA5AP35218 305 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 GDF10P55107 478 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 PTPRCAPQ14761 206 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 C3orf38Q5JPI3 329 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 GRAMD1AQ96CP6 724 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 PRR11Q96HE9 360 aaPredicted RBP20.93■□□□□ 0.94
LIME1-204ENST00000476183 FOXP3Q9BZS1 431 aa20.93■□□□□ 0.94
LIME1-204ENST00000476183 AAR2Q9Y312 384 aaKnown RBP20.93■□□□□ 0.94
LIME1-204ENST00000476183 GAPDHSO14556 408 aaPredicted RBP20.92■□□□□ 0.94
LIME1-204ENST00000476183 PPM1DO15297 605 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 GPR39O43194 453 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 OR1D5P58170 312 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 MSLNQ13421 630 aaPredicted RBP20.92■□□□□ 0.94
LIME1-204ENST00000476183 PEX6Q13608 980 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 SPARCL1Q14515 664 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 PRPSAP1Q14558 356 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 NR1D2Q14995 579 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 TBC1D25Q3MII6 688 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 C19orf48Q6RUI8 117 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 TMPRSS9Q7Z410 1059 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 PHYKPLQ8IUZ5 450 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 KLHDC8BQ8IXV7 354 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 ATG4AQ8WYN0 398 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 VPS35Q96QK1 796 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 TMEM121Q9BTD3 319 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 LZTFL1Q9NQ48 299 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 TBC1D29Q9UFV1 150 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 ARL5AQ9Y689 179 aa20.92■□□□□ 0.94
LIME1-204ENST00000476183 TRBV23OR9-2A0A075B6M9 112 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 RHPN2P1A8MT19 583 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 CHUKO15111 745 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 DXOO77932 396 aaKnown RBP20.91■□□□□ 0.94
LIME1-204ENST00000476183 METTL18O95568 372 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 SPAM1P38567 509 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 ADAMTS20P59510 1910 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 CHRNA6Q15825 494 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 MEI1Q5TIA1 1274 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 DENND5AQ6IQ26 1287 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 CRTC3Q6UUV7 619 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 FAM151BQ6UXP7 276 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 ZNF662Q6ZS27 426 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 SNIP1Q8TAD8 396 aaKnown RBP20.91■□□□□ 0.94
LIME1-204ENST00000476183 SLC37A2Q8TED4 501 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 FGF11Q92914 225 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 DCBLD2Q96PD2 775 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 ASCL3Q9NQ33 180 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 SLC23A2Q9UGH3 650 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 KCTD3Q9Y597 815 aa20.91■□□□□ 0.94
LIME1-204ENST00000476183 A0A087WV48 116 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 A6NCN8 305 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 UGT1A9O60656 530 aa20.9■□□□□ 0.94
LIME1-204ENST00000476183 CCDC175P0C221 793 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms